Non-Coding RNA Search

Pig2-19F06

Sequence:


               
               GGGTATAATCAGATTTACCATCTATTGAATGTTTATGTGCCAGGCACTGTTATGCGCTTG
GCATACCTTAATCTCATTCACTCATTACAGCAATCCTGTAGGTAGTCTGTTATTATCTCT
ACTTTACAGAAGAAAGGAGGGCCCAGAGGTGTTAGGTAACTTCCCCAAGGTCACACAGCT
GGTTAGTTACAGAACAGGAACCAGAACCCTTGTTTTAACTCCAAACCCTTGCTCCCCAGC
TTCTGTTGCCATTCAGAGGATCAGAGAAGTTGCCCAAGGCCCCACAGCAACATGGAGCGT
GGTGGGTTCATGAGCCTCCTTCTCCACTGCCCTCATTGCCCCCTGCTGCCGTTCGGGGTT
TGATTTCACTACCCTGAGTCTCATTTCCTTATCTGGCAGTGGAGGATCAAGCCACCAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGTATAATCAGATTTACCATCTATTGAATGTTTATGTGCCAGGCACTGTTATGCGCTTG
GCATACCTTAATCTCATTCACTCATTACAGCAATCCTGTAGGTAGTCTGTTATTATCTCT
ACTTTACAGAAGAAAGGAGGGCCCAGAGGTGTTAGGTAACTTCCCCAAGGTCACACAGCT
GGTTAGTTACAGAACAGGAACCAGAACCCTTGTTTTAACTCCAAACCCTTGCTCCCCAGC
TTCTGTTGCCATTCAGAGGATCAGAGAAGTTGCCCAAGGCCCCACAGCAACATGGAGCGT
GGTGGGTTCATGAGCCTCCTTCTCCACTGCCCTCATTGCCCCCTGCTGCCGTTCGGGGTT
TGATTTCACTACCCTGAGTCTCATTTCCTTATCTGGCAGTGGAGGATCAAGCCACCAC

Predicted RNA structure(s): 2 entry(ies)

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Predicted RNA structure(s): 2 entry(ies)

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               1-118, - strand, RNAz p=0.975336
               

               
               298-416, - strand, RNAz p=0.937252

Predicted RNA structure(s): 2 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-118, - strand, RNAz p=0.975336
               

               
               298-416, - strand, RNAz p=0.937252

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-416, gnl|bosTau2|chr25 (25420222-25419799)
               

               
               1-416, gnl|Hg17|chr16 (30013386-30012957)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-416, gnl|bosTau2|chr25 (25420222-25419799)
               

               
               1-416, gnl|Hg17|chr16 (30013386-30012957)

	1-118, - strand, RNAz p=0.975336
	298-416, - strand, RNAz p=0.937252

	1-416, gnl\|bosTau2\|chr25 (25420222-25419799)
	1-416, gnl\|Hg17\|chr16 (30013386-30012957)