Non-Coding RNA Search

Pig2-20J05

Sequence:


               
               GCCCACGCGTCCGCTTTGTCCCAGACGTCTTGGGGACAATAAACATCCTGTCTGTTGATC
CAGGAGCTCCAGGTGTCCTGTCCTGATTTGCTTCCCTCTTAAAGGGCCCTACAAAGCAGG
GAGGTGGACGGGATTAATACTTCCCCCCATAGCTGGAGAAATGGGGAGCACACAGAGAGG
TGGCAGGATTAGGTCAGGACCCCAGAGGGGGCCTGGAGTCCTAGGTGGCCCCCTCTCACC
AGCGTCTGGCCACGCCAGGACACGGCTGGGCCTCGGAGGTCGGCTCTAATGGCCTCTGAG
GCTGCCCTGTCACTGGGAGGAGAGGCCATAGCCTTGAATTCAAGTCTCCACCCTGTGGGG
CTTTCTTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCACGCGTCCGCTTTGTCCCAGACGTCTTGGGGACAATAAACATCCTGTCTGTTGATC
CAGGAGCTCCAGGTGTCCTGTCCTGATTTGCTTCCCTCTTAAAGGGCCCTACAAAGCAGG
GAGGTGGACGGGATTAATACTTCCCCCCATAGCTGGAGAAATGGGGAGCACACAGAGAGG
TGGCAGGATTAGGTCAGGACCCCAGAGGGGGCCTGGAGTCCTAGGTGGCCCCCTCTCACC
AGCGTCTGGCCACGCCAGGACACGGCTGGGCCTCGGAGGTCGGCTCTAATGGCCTCTGAG
GCTGCCCTGTCACTGGGAGGAGAGGCCATAGCCTTGAATTCAAGTCTCCACCCTGTGGGG
CTTTCTTTT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               272-369, + strand, RNAz p=0.999989

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               272-369, + strand, RNAz p=0.999989

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               14-369, gnl|bosTau2|chr8 (37014763-37014404)
               

               
               14-369, gnl|Hg17|chr8 (23209035-23209421)
               

               
               14-369, gnl|Mm7|chr14 (64342199-64341900)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               14-369, gnl|bosTau2|chr8 (37014763-37014404)
               

               
               14-369, gnl|Hg17|chr8 (23209035-23209421)
               

               
               14-369, gnl|Mm7|chr14 (64342199-64341900)

	14-369, gnl\|bosTau2\|chr8 (37014763-37014404)
	14-369, gnl\|Hg17\|chr8 (23209035-23209421)
	14-369, gnl\|Mm7\|chr14 (64342199-64341900)