Non-Coding RNA Search

Pig2-20M04

Sequence:


               
               GCACAGACCAGCCAACCTCTTGCAACCTCCAAGCTGACAGGCCTCATCAGGGGAGGAGGG
ACCCCCTCCACAGGAGAACTGATAGCAGGCTTTTGGTGGGGGAGGCATCAAGAACTCTGG
AGGGCGGTTGCAATCATGTAAGCAGACATGGAGACTGCCATGTGTGTCTGCTCTCCATGC
TGTACATGGCAGAGATGTTGTCCCCGGCTATGCTCGTGTCTGTGCTGCAAGTTCCTCTTC
ACCTCGGAGCGGAACTGCACCTGCTTTCCCTGCCCCTATAAGGACGAGCGGAACTGCCAG
TGCTGCCACTGCACCTGTTCCGAGAACCCCAACTGCCACTGGTGCTGCTGCTCCTGGGCC
AATGACCCCAACTGTAAGTGCTGCTGCACAACCAGCGGCAACCTCCAGTGCCACTACTAT
GAGAGCCGCTGCTGCCGCAATGCCACCATCACGTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACAGACCAGCCAACCTCTTGCAACCTCCAAGCTGACAGGCCTCATCAGGGGAGGAGGG
ACCCCCTCCACAGGAGAACTGATAGCAGGCTTTTGGTGGGGGAGGCATCAAGAACTCTGG
AGGGCGGTTGCAATCATGTAAGCAGACATGGAGACTGCCATGTGTGTCTGCTCTCCATGC
TGTACATGGCAGAGATGTTGTCCCCGGCTATGCTCGTGTCTGTGCTGCAAGTTCCTCTTC
ACCTCGGAGCGGAACTGCACCTGCTTTCCCTGCCCCTATAAGGACGAGCGGAACTGCCAG
TGCTGCCACTGCACCTGTTCCGAGAACCCCAACTGCCACTGGTGCTGCTGCTCCTGGGCC
AATGACCCCAACTGTAAGTGCTGCTGCACAACCAGCGGCAACCTCCAGTGCCACTACTAT
GAGAGCCGCTGCTGCCGCAATGCCACCATCACGTTCC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61849318|ref|XP_598572.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61849318|ref|XP_598572.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               340-457, - strand, RNAz p=0.857234

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               340-457, - strand, RNAz p=0.857234

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               4-457, gnl|bosTau2|chr1 (77757041-77756587)
               

               
               4-457, gnl|Hg17|chr3 (141879627-141880079)
               

               
               4-457, gnl|Mm7|chr9 (97011633-97011178)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-457, gnl|bosTau2|chr1 (77757041-77756587)
               

               
               4-457, gnl|Hg17|chr3 (141879627-141880079)
               

               
               4-457, gnl|Mm7|chr9 (97011633-97011178)

	4-457, gnl\|bosTau2\|chr1 (77757041-77756587)
	4-457, gnl\|Hg17\|chr3 (141879627-141880079)
	4-457, gnl\|Mm7\|chr9 (97011633-97011178)