Non-Coding RNA Search

Pig2-22G06

Sequence:


               
               GAAACAACTTCCCATTTGCTTTTCTTCATAGTTGGCATAAATATCTCGCGTATTAGTCAG
AATAAAGCTGTTGAGAATAAGACACATGGAGAGAGTTAGTTCATCATGATGTGGCTTGAC
CTTCCTGCTGTCAGAATGGGTCACTTTAGAGCAAAGTCAGACACCAACACAGCTCCTCCT
GGCCCCAGTGGATACCGAGAGCCGGTGGTGGGGTGGTCCGCCTCGAGACAGGCAATTAGA
GGAGGCACTGTCCATGGAGAATTGAAGAACAATAATAAAACCAGCTGAAAGCTGGTCTGC
TTCGTGTTATCACCAGGAGCAGTGATTCTGGACAACTTTGGTGTTTACACACACCCCTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAAACAACTTCCCATTTGCTTTTCTTCATAGTTGGCATAAATATCTCGCGTATTAGTCAG
AATAAAGCTGTTGAGAATAAGACACATGGAGAGAGTTAGTTCATCATGATGTGGCTTGAC
CTTCCTGCTGTCAGAATGGGTCACTTTAGAGCAAAGTCAGACACCAACACAGCTCCTCCT
GGCCCCAGTGGATACCGAGAGCCGGTGGTGGGGTGGTCCGCCTCGAGACAGGCAATTAGA
GGAGGCACTGTCCATGGAGAATTGAAGAACAATAATAAAACCAGCTGAAAGCTGGTCTGC
TTCGTGTTATCACCAGGAGCAGTGATTCTGGACAACTTTGGTGTTTACACACACCCCTCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               159-278, - strand, RNAz p=0.645984

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               159-278, - strand, RNAz p=0.645984

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-357, gnl|bosTau2|chr9 (24069084-24069434)
               

               
               2-357, gnl|Hg17|chr6 (108010536-108010892)
               

               
               2-357, gnl|Mm7|chr10 (42889073-42888736)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-357, gnl|bosTau2|chr9 (24069084-24069434)
               

               
               2-357, gnl|Hg17|chr6 (108010536-108010892)
               

               
               2-357, gnl|Mm7|chr10 (42889073-42888736)

	2-357, gnl\|bosTau2\|chr9 (24069084-24069434)
	2-357, gnl\|Hg17\|chr6 (108010536-108010892)
	2-357, gnl\|Mm7\|chr10 (42889073-42888736)