Non-Coding RNA Search

Pig2-23C07

Sequence:


               
               GCGGTCATTGAGATTCTGCATAGTCACCTTCTCATTCCCAGAGAGGAGGCCCCCCTCACT
TCCAGCAAAGCCAGCACAAGCAGCACTTCCAAGGGTACCACCAGCATGGCTCCCGACAGA
AGCACTGCCCAGGCCCCCTCCCAAAGCATTGGAGAATCCACTTCCAGCACTAGAGCTGCT
GCATATATTGCTGCTTGCAAAGCCAGTGCCTCCACTGGGTGGTCTGAGAGATCCAGCGCC
AGACCGTAAGCAAATATGCCTGGACCCACTGGAAAATCGGAGAGACATGGTAGCGTGAGA
AATGTTTGCCTTGTCTGTGGGCAGCTGTAATGTCAAAGGAGAACAGAACATTGTGTGCTG
AGGGTTTACTCTGGGCTTTTATACACAATTATTGGGGTGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGTCATTGAGATTCTGCATAGTCACCTTCTCATTCCCAGAGAGGAGGCCCCCCTCACT
TCCAGCAAAGCCAGCACAAGCAGCACTTCCAAGGGTACCACCAGCATGGCTCCCGACAGA
AGCACTGCCCAGGCCCCCTCCCAAAGCATTGGAGAATCCACTTCCAGCACTAGAGCTGCT
GCATATATTGCTGCTTGCAAAGCCAGTGCCTCCACTGGGTGGTCTGAGAGATCCAGCGCC
AGACCGTAAGCAAATATGCCTGGACCCACTGGAAAATCGGAGAGACATGGTAGCGTGAGA
AATGTTTGCCTTGTCTGTGGGCAGCTGTAATGTCAAAGGAGAACAGAACATTGTGTGCTG
AGGGTTTACTCTGGGCTTTTATACACAATTATTGGGGTGTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               40-159, - strand, RNAz p=0.889774

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               40-159, - strand, RNAz p=0.889774

Predicted microRNA(s): 1 entry(ies)

More info

Predicted microRNA(s): 1 entry(ies)

Help | Less info


               
               127-232, - strand, RNAmicro p=0.997843

Predicted microRNA(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               127-232, - strand, RNAmicro p=0.997843

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               1-401, gnl|bosTau2|chr19 (33829507-33829110)
               

               
               1-401, gnl|Hg17|chr17 (36209384-36209783)
               

               
               1-401, gnl|Mm7|chr11 (99483597-99483991)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-401, gnl|bosTau2|chr19 (33829507-33829110)
               

               
               1-401, gnl|Hg17|chr17 (36209384-36209783)
               

               
               1-401, gnl|Mm7|chr11 (99483597-99483991)

	1-401, gnl\|bosTau2\|chr19 (33829507-33829110)
	1-401, gnl\|Hg17\|chr17 (36209384-36209783)
	1-401, gnl\|Mm7\|chr11 (99483597-99483991)