Pig2-23J11
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GGTGCCAGAGCAAGGGTCAGCTCAGAGCCTTCCATCGCAGCTGTGCTGGGCCCCCCAGGA
TCCAGGTCCCCGCAGGGCAGGTGCTGCCACCTGGTCCTGACGAAGGGGTCAAGCTAACAA
TTACCGCCTTCTCTGAGTTGAGGGCAAAAGAACCTTCCCTTCCAGTCACCACACCCTCCC
GGCCCCAGGGTGGCTTTTAGGACCCCTGTCCCTTTCTGTTGGGTGTTGTGTTCCACCCAA
CTCCTTGTGTTCAGTCCCTGTAGCGAAAGGCTGGGGAGAGGGGGTCTTCTCACCACCCCT
CCCCACCAGTCCCCCCACCAGCCCAGCTGGTTTCTAAAGAAGTTGGGGGGGTCTGATGCC
CTGAATTGTGTGTGATTTAATAAGACATCCTGTGTGTGTGCAGCCAAAAGGGACAGGCAG
GGTCTGGGTGGGATTTACGA
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Blue-coloured subsequences are predicted RNA structures by RNAz
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GGTGCCAGAGCAAGGGTCAGCTCAGAGCCTTCCATCGCAGCTGTGCTGGGCCCCCCAGGA
TCCAGGTCCCCGCAGGGCAGGTGCTGCCACCTGGTCCTGACGAAGGGGTCAAGCTAACAA
TTACCGCCTTCTCTGAGTTGAGGGCAAAAGAACCTTCCCTTCCAGTCACCACACCCTCCC
GGCCCCAGGGTGGCTTTTAGGACCCCTGTCCCTTTCTGTTGGGTGTTGTGTTCCACCCAA
CTCCTTGTGTTCAGTCCCTGTAGCGAAAGGCTGGGGAGAGGGGGTCTTCTCACCACCCCT
CCCCACCAGTCCCCCCACCAGCCCAGCTGGTTTCTAAAGAAGTTGGGGGGGTCTGATGCC
CTGAATTGTGTGTGATTTAATAAGACATCCTGTGTGTGTGCAGCCAAAAGGGACAGGCAG
GGTCTGGGTGGGATTTACGA
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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250-344, 4072285 BARC 10BOV Bos taurus cDNA clone 10BOV23_E14 3', mRNA
(gb|CK947462.1|), blast E-value=4e-21, identity=89.47% |
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250-344, BE04023B2C06 BE04 Normalized and Subtracted bovine embryonic and
(gb|CN442443.1|), blast E-value=4e-21, identity=89.47% |
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250-344, 991221BPBA008752HT BPBA Bos taurus cDNA, mRNA sequence
(gb|DY144736.1|), blast E-value=4e-21, identity=89.47% |
PigEST conread start position and end position of sequence similarity to another annotated EST (NCBI dbEST),
transcript identifier and annotation,
blast E-value,
PigEST conread identity to the similar transcript
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250-344, 4072285 BARC 10BOV Bos taurus cDNA clone 10BOV23_E14 3', mRNA
(gb|CK947462.1|), blast E-value=4e-21, identity=89.47% |
|
250-344, BE04023B2C06 BE04 Normalized and Subtracted bovine embryonic and
(gb|CN442443.1|), blast E-value=4e-21, identity=89.47% |
|
250-344, 991221BPBA008752HT BPBA Bos taurus cDNA, mRNA sequence
(gb|DY144736.1|), blast E-value=4e-21, identity=89.47% |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map