Non-Coding RNA Search

Pig2-24I05

Sequence:


               
               GCCCACTTGTCAGTGGACGTCTCCTTGCGTTCAATGTAGTAGCCCGTAACCCGGGAACCA
CCATCGTCTTTGGGTCGGGACCAGGACAGGCTGACAGAACTCTTGGTCACATCGAGTACT
TCTGGAGGGTTGCTTGGAGGCTCTGGAGGGTCTGGGAATATAAGTGGGAAATACACAAGT
GTTAGAGTGCAGTCCCAAATCCTGTAAGCTGGTGGCTTTCATTTCGAAACAAAAGAGTAC
TGAAGATTTTTACAGTGTTGTGGTTGGAAGGGCACTTACTCAGTGGTGTTTTTGGTATGA
CTGGTTCCTCAGATTTCAAGGGTTTGCTTATTCCAAACTGGTTTTCTGCTGAAACACGGA
AATGGTATTCCACGTTTTCTTTGAGGCCTTTTACCACCAAAGATGTACCTCGGACTCTGG
A

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCACTTGTCAGTGGACGTCTCCTTGCGTTCAATGTAGTAGCCCGTAACCCGGGAACCA
CCATCGTCTTTGGGTCGGGACCAGGACAGGCTGACAGAACTCTTGGTCACATCGAGTACT
TCTGGAGGGTTGCTTGGAGGCTCTGGAGGGTCTGGGAATATAAGTGGGAAATACACAAGT
GTTAGAGTGCAGTCCCAAATCCTGTAAGCTGGTGGCTTTCATTTCGAAACAAAAGAGTAC
TGAAGATTTTTACAGTGTTGTGGTTGGAAGGGCACTTACTCAGTGGTGTTTTTGGTATGA
CTGGTTCCTCAGATTTCAAGGGTTTGCTTATTCCAAACTGGTTTTCTGCTGAAACACGGA
AATGGTATTCCACGTTTTCTTTGAGGCCTTTTACCACCAAAGATGTACCTCGGACTCTGG
A

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|1890865|gb|AAB49764.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|1890865|gb|AAB49764.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               81-198, + strand, RNAz p=0.630724

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               81-198, + strand, RNAz p=0.630724

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-421, gnl|bosTau2|chr2 (7865491-7865072)
               

               
               2-421, gnl|Hg17|chr2 (179229336-179229757)
               

               
               2-421, gnl|Mm7|chr2 (76561045-76561468)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-421, gnl|bosTau2|chr2 (7865491-7865072)
               

               
               2-421, gnl|Hg17|chr2 (179229336-179229757)
               

               
               2-421, gnl|Mm7|chr2 (76561045-76561468)

	2-421, gnl\|bosTau2\|chr2 (7865491-7865072)
	2-421, gnl\|Hg17\|chr2 (179229336-179229757)
	2-421, gnl\|Mm7\|chr2 (76561045-76561468)