Non-Coding RNA Search

Pig2-24K17

Sequence:


               
               GCCAGTCAACTCCTAGTCATCCTTCAAGACTCAGCTTGCTCATTACTTCCTCTTTGAGAT
TTCCCTGACAATCTCCAGCAAAGTTGGTCCATCTCTGTGGGCTCACAGCACTTTGTTCAG
GGCTCTATTATAACAATTAATAATACATTGATTGTAATGATTAACTTTACATGTTTGTCT
CTTCCCTTTTGAAATTGCTCTCAGCAGTGGTTTACCAGCCACATCAAAGCAAATAAACGA
AAACCAGTCCCATGGCTCTGTAGCAACTTTACTTGATCCTGAGAACCGTCTTTACTCTCC
TTCCTTTCTGTCTGCTTCTGTTAGCTTAGGTTTGCCACCTTCTCTTGCTGCCAGTATACT
TGAGCTGGAAGCAGTTGCCGATGCTGATCGGTAGTGAGAGGGGTCGTTTAAGGCTTCTTG
GAGTTAGACCGAGCCAGGAGATGGGGCTCATTATCCATTACACTTTAGAAAGCAGCTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCAGTCAACTCCTAGTCATCCTTCAAGACTCAGCTTGCTCATTACTTCCTCTTTGAGAT
TTCCCTGACAATCTCCAGCAAAGTTGGTCCATCTCTGTGGGCTCACAGCACTTTGTTCAG
GGCTCTATTATAACAATTAATAATACATTGATTGTAATGATTAACTTTACATGTTTGTCT
CTTCCCTTTTGAAATTGCTCTCAGCAGTGGTTTACCAGCCACATCAAAGCAAATAAACGA
AAACCAGTCCCATGGCTCTGTAGCAACTTTACTTGATCCTGAGAACCGTCTTTACTCTCC
TTCCTTTCTGTCTGCTTCTGTTAGCTTAGGTTTGCCACCTTCTCTTGCTGCCAGTATACT
TGAGCTGGAAGCAGTTGCCGATGCTGATCGGTAGTGAGAGGGGTCGTTTAAGGCTTCTTG
GAGTTAGACCGAGCCAGGAGATGGGGCTCATTATCCATTACACTTTAGAAAGCAGCTT

Aligned organism(s): 11 entry(ies)

More info

Aligned organism(s): 11 entry(ies)

Help | Less info


               
               1-478, gnl|bosTau2|chrX (18821545-18821070)
               

               
               1-478, gnl|canFam2|chrX (86522499-86523064)
               

               
               1-478, gnl|hg17|chrX (109300177-109300685)
               

               
               1-478, gnl|Hg17|chrX (109300745-109300292)
               

               
               1-478, gnl|loxAfr1|scaffold_34855 (7757-8294)
               

               
               1-478, gnl|mm7|chrX (137566659-137567166)
               

               
               1-478, gnl|Mm7|chrX (137567226-137566769)
               

               
               1-478, gnl|oryCun1|scaffold_198908 (151538-152044)
               

               
               1-478, gnl|panTro1|chrX (113001665-113002173)
               

               
               1-478, gnl|rheMac2|chrX (108969795-108970322)
               

               
               1-478, gnl|rn3|chrX (35702589-35702079)

Aligned organism(s): 11 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-478, gnl|bosTau2|chrX (18821545-18821070)
               

               
               1-478, gnl|canFam2|chrX (86522499-86523064)
               

               
               1-478, gnl|hg17|chrX (109300177-109300685)
               

               
               1-478, gnl|Hg17|chrX (109300745-109300292)
               

               
               1-478, gnl|loxAfr1|scaffold_34855 (7757-8294)
               

               
               1-478, gnl|mm7|chrX (137566659-137567166)
               

               
               1-478, gnl|Mm7|chrX (137567226-137566769)
               

               
               1-478, gnl|oryCun1|scaffold_198908 (151538-152044)
               

               
               1-478, gnl|panTro1|chrX (113001665-113002173)
               

               
               1-478, gnl|rheMac2|chrX (108969795-108970322)
               

               
               1-478, gnl|rn3|chrX (35702589-35702079)

	1-478, gnl\|bosTau2\|chrX (18821545-18821070)
	1-478, gnl\|canFam2\|chrX (86522499-86523064)
	1-478, gnl\|hg17\|chrX (109300177-109300685)
	1-478, gnl\|Hg17\|chrX (109300745-109300292)
	1-478, gnl\|loxAfr1\|scaffold_34855 (7757-8294)
	1-478, gnl\|mm7\|chrX (137566659-137567166)
	1-478, gnl\|Mm7\|chrX (137567226-137566769)
	1-478, gnl\|oryCun1\|scaffold_198908 (151538-152044)
	1-478, gnl\|panTro1\|chrX (113001665-113002173)
	1-478, gnl\|rheMac2\|chrX (108969795-108970322)
	1-478, gnl\|rn3\|chrX (35702589-35702079)