Non-Coding RNA Search

Pig2-24N02

Sequence:


               
               GGTCAGACACTAAGTGCCCAGAGCAGGTTGGCTTTGGAAGTACTGCATCTTTATCAGTAC
CTGCGTATGCCAGTCGAATGTCTACATTTCTGCCAGCAAAGCAGGAACTAACAGACCAGT
GCCAGTGTATTCCAGAGAAGGGAGAAGCAGGATTACAGGGAGCTCCAGGCTCACCGGGCC
AGAAAGGAGACAAAGGACAGCAGGGTGAAGTTGGTCTTAAAGGTGAATCAGGCGCTCCTG
GAATTCCTGGTGAAAAGGGTGAAAATGGTTTACATGGAGTTCCAGGATTACCCGGTCAAA
AGGGAGAGCAAGGTTTTGAAGGCCTTAAAGGAGAAATTGGTGAAAAGGAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTCAGACACTAAGTGCCCAGAGCAGGTTGGCTTTGGAAGTACTGCATCTTTATCAGTAC
CTGCGTATGCCAGTCGAATGTCTACATTTCTGCCAGCAAAGCAGGAACTAACAGACCAGT
GCCAGTGTATTCCAGAGAAGGGAGAAGCAGGATTACAGGGAGCTCCAGGCTCACCGGGCC
AGAAAGGAGACAAAGGACAGCAGGGTGAAGTTGGTCTTAAAGGTGAATCAGGCGCTCCTG
GAATTCCTGGTGAAAAGGGTGAAAATGGTTTACATGGAGTTCCAGGATTACCCGGTCAAA
AGGGAGAGCAAGGTTTTGAAGGCCTTAAAGGAGAAATTGGTGAAAAGGAAAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               13-131, - strand, RNAz p=0.598041

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               13-131, - strand, RNAz p=0.598041

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               13-141, gnl|bosTau2|chr9 (3759594-3759722)
               

               
               13-141, gnl|Hg17|chr6 (70703396-70703524)
               

               
               13-141, gnl|Mm7|chr1 (24737148-24737020)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               13-141, gnl|bosTau2|chr9 (3759594-3759722)
               

               
               13-141, gnl|Hg17|chr6 (70703396-70703524)
               

               
               13-141, gnl|Mm7|chr1 (24737148-24737020)

	13-141, gnl\|bosTau2\|chr9 (3759594-3759722)
	13-141, gnl\|Hg17\|chr6 (70703396-70703524)
	13-141, gnl\|Mm7\|chr1 (24737148-24737020)