Pig2-24O01
|
GAGAAGACAACATCCCACAGGACAACAGTTCTGGCTATGCGACTGCCTTGTGGCTCTTGG
TACAGTGCCCTCCCACTGCATCCCCTGAGCACTGCTCCACTGGGAAGACTGAATGGGCAG
TTGCTGCTGTCCTAAGCTATCGTGGACCCCTCGGCCAAAGAAATAACTCTGTCCTCCCCA
GTCTCCCCTTATCTGCCCCACTGAGGCTCCCTTGCTGCAGTGAAACGATTCTTCTACAAT
TTCAAGTGCCTGGAGTTAACTTATTTATTAATTTATTAACTTATTTGTAATGCAGACAAG
TTTCAAAGCTCTTATTCCGTTCAATTAAATAGCACAGTGAGCAAAGGTTTTTAACTGCAT
TTCTAGCAATTGCAGGTGAGGGCCTGCTCTGTCAGTAGAATATAATTACACCAGCCTTCT
AATCATCTGCTCATTAATGCCAGCCTTGG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GAGAAGACAACATCCCACAGGACAACAGTTCTGGCTATGCGACTGCCTTGTGGCTCTTGG
TACAGTGCCCTCCCACTGCATCCCCTGAGCACTGCTCCACTGGGAAGACTGAATGGGCAG
TTGCTGCTGTCCTAAGCTATCGTGGACCCCTCGGCCAAAGAAATAACTCTGTCCTCCCCA
GTCTCCCCTTATCTGCCCCACTGAGGCTCCCTTGCTGCAGTGAAACGATTCTTCTACAAT
TTCAAGTGCCTGGAGTTAACTTATTTATTAATTTATTAACTTATTTGTAATGCAGACAAG
TTTCAAAGCTCTTATTCCGTTCAATTAAATAGCACAGTGAGCAAAGGTTTTTAACTGCAT
TTCTAGCAATTGCAGGTGAGGGCCTGCTCTGTCAGTAGAATATAATTACACCAGCCTTCT
AATCATCTGCTCATTAATGCCAGCCTTGG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
10-449, gnl|bosTau2|chr11 (23296781-23297221) |
|
10-449, gnl|canFam2|chr10 (51749939-51750192) |
|
10-449, gnl|dasNov1|scaffold_4267 (4510-4212) |
|
10-449, gnl|echTel1|scaffold_312265 (1167-1446) |
|
10-449, gnl|galGal2|chr3 (22946502-22946784) |
|
10-449, gnl|hg17|chr2 (46511432-46511738) |
|
10-449, gnl|Hg17|chr2 (46511891-46511459) |
|
10-449, gnl|mm7|chr17 (85123233-85123535) |
|
10-449, gnl|Mm7|chr17 (85123704-85123263) |
|
10-449, gnl|monDom2|scaffold_1 (6003811-6004089) |
|
10-449, gnl|oryCun1|scaffold_172732 (21370-21076) |
|
10-449, gnl|panTro1|chr12 (48496174-48496480) |
|
10-449, gnl|rheMac2|chr13 (46490870-46491174) |
|
10-449, gnl|rn3|chr6 (10286877-10287179) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
10-449, gnl|bosTau2|chr11 (23296781-23297221) |
|
10-449, gnl|canFam2|chr10 (51749939-51750192) |
|
10-449, gnl|dasNov1|scaffold_4267 (4510-4212) |
|
10-449, gnl|echTel1|scaffold_312265 (1167-1446) |
|
10-449, gnl|galGal2|chr3 (22946502-22946784) |
|
10-449, gnl|hg17|chr2 (46511432-46511738) |
|
10-449, gnl|Hg17|chr2 (46511891-46511459) |
|
10-449, gnl|mm7|chr17 (85123233-85123535) |
|
10-449, gnl|Mm7|chr17 (85123704-85123263) |
|
10-449, gnl|monDom2|scaffold_1 (6003811-6004089) |
|
10-449, gnl|oryCun1|scaffold_172732 (21370-21076) |
|
10-449, gnl|panTro1|chr12 (48496174-48496480) |
|
10-449, gnl|rheMac2|chr13 (46490870-46491174) |
|
10-449, gnl|rn3|chr6 (10286877-10287179) |