Non-Coding RNA Search

Pig2-28C11

Sequence:


               
               GGGCAACTCTTGCTTTAGCTGATACGGCACAGCCTGCTGGGGAGGCTGAGACATCTAAAC
ATCCAGCAAGGTCACAGGCTATACAGGGAGTGCCATGACAGCCTCTTGAGAGTATGCTCT
CAGCCAAAACACCGTTAGCTGGCAAAACCCCAAGCACAGTGGAATGGCATTTTTATCATA
ATAGGGCTGAAATGACCTGGCATATGAGGACCGCAGGGCTGAAGATGGAACAAAAAGCCC
CTGTGTGTCTAGGATACTGCTCTTCTAACCATACTGTGAAAGCAAGCAGAGAATGACAGC
ACGGCCAGACCAAATGGGATCTGCTCACTGCACAATGACCAGCATGAAACTCACTTATTT
TATCAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGCAACTCTTGCTTTAGCTGATACGGCACAGCCTGCTGGGGAGGCTGAGACATCTAAAC
ATCCAGCAAGGTCACAGGCTATACAGGGAGTGCCATGACAGCCTCTTGAGAGTATGCTCT
CAGCCAAAACACCGTTAGCTGGCAAAACCCCAAGCACAGTGGAATGGCATTTTTATCATA
ATAGGGCTGAAATGACCTGGCATATGAGGACCGCAGGGCTGAAGATGGAACAAAAAGCCC
CTGTGTGTCTAGGATACTGCTCTTCTAACCATACTGTGAAAGCAAGCAGAGAATGACAGC
ACGGCCAGACCAAATGGGATCTGCTCACTGCACAATGACCAGCATGAAACTCACTTATTT
TATCAAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               2-152, - strand, RNAz p=0.971995

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               2-152, - strand, RNAz p=0.971995

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

Help | Less info


               
               2-194, gnl|bosTau2|chr21 (4220702-4220513)
               

               
               2-194, gnl|canFam2|chr3 (44243259-44242958)
               

               
               2-194, gnl|dasNov1|scaffold_16138 (13672-13370)
               

               
               2-194, gnl|hg17|chr15 (97701555-97701878)
               

               
               2-194, gnl|Hg17|chr15 (97701786-97701589)
               

               
               2-194, gnl|loxAfr1|scaffold_9742 (39069-38768)
               

               
               2-194, gnl|mm7|chr7 (63405594-63405300)
               

               
               2-194, gnl|Mm7|chr7 (63405366-63405558)
               

               
               2-194, gnl|monDom2|scaffold_12 (61510168-61509851)
               

               
               2-194, gnl|oryCun1|scaffold_207218 (8599-8847)
               

               
               2-194, gnl|panTro1|chr16 (98771875-98772198)
               

               
               2-194, gnl|rheMac2|chr7 (79375297-79375598)
               

               
               2-194, gnl|rn3|chr1 (122377479-122377190)

Aligned organism(s): 13 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-194, gnl|bosTau2|chr21 (4220702-4220513)
               

               
               2-194, gnl|canFam2|chr3 (44243259-44242958)
               

               
               2-194, gnl|dasNov1|scaffold_16138 (13672-13370)
               

               
               2-194, gnl|hg17|chr15 (97701555-97701878)
               

               
               2-194, gnl|Hg17|chr15 (97701786-97701589)
               

               
               2-194, gnl|loxAfr1|scaffold_9742 (39069-38768)
               

               
               2-194, gnl|mm7|chr7 (63405594-63405300)
               

               
               2-194, gnl|Mm7|chr7 (63405366-63405558)
               

               
               2-194, gnl|monDom2|scaffold_12 (61510168-61509851)
               

               
               2-194, gnl|oryCun1|scaffold_207218 (8599-8847)
               

               
               2-194, gnl|panTro1|chr16 (98771875-98772198)
               

               
               2-194, gnl|rheMac2|chr7 (79375297-79375598)
               

               
               2-194, gnl|rn3|chr1 (122377479-122377190)

	2-194, gnl\|bosTau2\|chr21 (4220702-4220513)
	2-194, gnl\|canFam2\|chr3 (44243259-44242958)
	2-194, gnl\|dasNov1\|scaffold_16138 (13672-13370)
	2-194, gnl\|hg17\|chr15 (97701555-97701878)
	2-194, gnl\|Hg17\|chr15 (97701786-97701589)
	2-194, gnl\|loxAfr1\|scaffold_9742 (39069-38768)
	2-194, gnl\|mm7\|chr7 (63405594-63405300)
	2-194, gnl\|Mm7\|chr7 (63405366-63405558)
	2-194, gnl\|monDom2\|scaffold_12 (61510168-61509851)
	2-194, gnl\|oryCun1\|scaffold_207218 (8599-8847)
	2-194, gnl\|panTro1\|chr16 (98771875-98772198)
	2-194, gnl\|rheMac2\|chr7 (79375297-79375598)
	2-194, gnl\|rn3\|chr1 (122377479-122377190)