Non-Coding RNA Search

Pig2-28I09

Sequence:


               
               GGTTATCTCAACACTTGAGCCCTGAGGAACACAGCGGGCCTCTTGACAACGGGGGAGTTG
GCCCTTGGTGGGAGTGGGGAGAGCCTTGTCCTCACTCATCTCACCCTCCTTTCTTCTTCC
TCAGGCTTTGGCCCTGTGTTTATCACCAGTGACCCTGACAGCTTCTGGCAACAACTCAAT
GAGATACACGCCTTGGGAGGTGGAGACGAGCCCGAGATGTGCTTGTCAGCCCTGGAGGTC
TGCCCTCTTCCCCCCTTCCCTTCTTCTCCTCCCCTTTCCAGGACCCACAAGCAAGGGAAC
TAGAGCTTCCCTGGGACACCCCCTGCCCCCTGGCCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTTATCTCAACACTTGAGCCCTGAGGAACACAGCGGGCCTCTTGACAACGGGGGAGTTG
GCCCTTGGTGGGAGTGGGGAGAGCCTTGTCCTCACTCATCTCACCCTCCTTTCTTCTTCC
TCAGGCTTTGGCCCTGTGTTTATCACCAGTGACCCTGACAGCTTCTGGCAACAACTCAAT
GAGATACACGCCTTGGGAGGTGGAGACGAGCCCGAGATGTGCTTGTCAGCCCTGGAGGTC
TGCCCTCTTCCCCCCTTCCCTTCTTCTCCTCCCCTTTCCAGGACCCACAAGCAAGGGAAC
TAGAGCTTCCCTGGGACACCCCCTGCCCCCTGGCCCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               2-156, - strand, RNAz p=0.987587

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               2-156, - strand, RNAz p=0.987587

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               35-140, + strand, RNAmicro p=0.993053

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               35-140, + strand, RNAmicro p=0.993053

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-324, gnl|bosTau2|chr23 (23409380-23409048)
               

               
               2-324, gnl|Hg17|chr6 (31845989-31845683)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-324, gnl|bosTau2|chr23 (23409380-23409048)
               

               
               2-324, gnl|Hg17|chr6 (31845989-31845683)

	2-324, gnl\|bosTau2\|chr23 (23409380-23409048)
	2-324, gnl\|Hg17\|chr6 (31845989-31845683)