Non-Coding RNA Search

Pig2-28P16

Sequence:


               
               GCCCGTTTTCCCCGACTCACCTCCGGCCCCTGTTTGGGTGTGGCTGGGACACCCTGCACC
CTTTGCCGGCTGCTTCCCCCACCCCCACCCCCCAGAGTCCCAGGCCCAGAAGCGCTGGCT
GGGCAGGCGTGAGGCTGGTGCCAAGCGCGTGTACATGATTTTGTTTTGCACGTGTGGTTT
GCGCGGTGGTTTGGTTTGACTTGTTTGTGCATCCTGTGAACAATGACGGTGCTTCGTGTC
ACTAGCATAGCATAGAAACAGGAATAGATGTGGACCTGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCGTTTTCCCCGACTCACCTCCGGCCCCTGTTTGGGTGTGGCTGGGACACCCTGCACC
CTTTGCCGGCTGCTTCCCCCACCCCCACCCCCCAGAGTCCCAGGCCCAGAAGCGCTGGCT
GGGCAGGCGTGAGGCTGGTGCCAAGCGCGTGTACATGATTTTGTTTTGCACGTGTGGTTT
GCGCGGTGGTTTGGTTTGACTTGTTTGTGCATCCTGTGAACAATGACGGTGCTTCGTGTC
ACTAGCATAGCATAGAAACAGGAATAGATGTGGACCTGA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               127-246, - strand, RNAz p=0.832557

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               127-246, - strand, RNAz p=0.832557

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               164-228, + strand, RNAmicro p=0.973365

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               164-228, + strand, RNAmicro p=0.973365

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-277, gnl|bosTau2|chr11 (55321773-55322045)
               

               
               2-277, gnl|Hg17|chr2 (27082016-27082306)
               

               
               2-277, gnl|Mm7|chr5 (29829350-29829658)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-277, gnl|bosTau2|chr11 (55321773-55322045)
               

               
               2-277, gnl|Hg17|chr2 (27082016-27082306)
               

               
               2-277, gnl|Mm7|chr5 (29829350-29829658)

	2-277, gnl\|bosTau2\|chr11 (55321773-55322045)
	2-277, gnl\|Hg17\|chr2 (27082016-27082306)
	2-277, gnl\|Mm7\|chr5 (29829350-29829658)