Pig2-29B23
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGGTGATGGTTGGGGCAAGCGGATTACTTCCCCAGCCTCTTCTGTGTCCCTTTGGTGG TATTCAAAAGAGAAAAAGAAATTGCCAGGAAGCTGGAGTTCGATGGGCTGTACATCACCG AACAGCCTTCTGAGGATGACATCAAGGGGCAGTGGGATCGTTTGGTGATCAACACACCAT CTTTTCCTAACAACTACTGGGACAAGTTTGTAAAGAGAAAGGTGATCAACAAGTATGGTG ATCTCTACGGAGCAGAACGCATTGCTGAACTCCTGGGTTTGGACAAAAATGCCCTTGACT TTAGCCCAGTGGAAGAGACCAAAGCGGAGGCGGCCTCTCTGGTGTCATGGCTAAGTTCCA TCGACATGAAGTACCATA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGGTGATGGTTGGGGCAAGCGGATTACTTCCCCAGCCTCTTCTGTGTCCCTTTGGTGG TATTCAAAAGAGAAAAAGAAATTGCCAGGAAGCTGGAGTTCGATGGGCTGTACATCACCG AACAGCCTTCTGAGGATGACATCAAGGGGCAGTGGGATCGTTTGGTGATCAACACACCAT CTTTTCCTAACAACTACTGGGACAAGTTTGTAAAGAGAAAGGTGATCAACAAGTATGGTG ATCTCTACGGAGCAGAACGCATTGCTGAACTCCTGGGTTTGGACAAAAATGCCCTTGACT TTAGCCCAGTGGAAGAGACCAAAGCGGAGGCGGCCTCTCTGGTGTCATGGCTAAGTTCCA TCGACATGAAGTACCATA |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 41-159, + strand, RNAz p=0.736662 | |
| 220-338, - strand, RNAz p=0.725035 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 41-159, + strand, RNAz p=0.736662 | |
| 220-338, - strand, RNAz p=0.725035 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 41-178, gnl|bosTau2|chr10 (17700114-17699977) | |
| 41-178, gnl|canFam2|chr30 (4185418-4185233) | |
| 41-178, gnl|danRer3|chr20 (37101695-37101857) | |
| 41-178, gnl|dasNov1|scaffold_168843 (4389-4549) | |
| 41-178, gnl|echTel1|scaffold_239610 (709-531) | |
| 41-178, gnl|fr1|chrUn (81748582-81748734) | |
| 41-178, gnl|galGal2|chr5 (27066994-27066852) | |
| 41-178, gnl|hg17|chr15 (31927764-31927949) | |
| 41-178, gnl|Hg17|chr15 (31927777-31927914) | |
| 41-178, gnl|loxAfr1|scaffold_118216 (1493-1312) | |
| 41-178, gnl|mm7|chr2 (112495570-112495385) | |
| 41-178, gnl|Mm7|chr2 (112495555-112495418) | |
| 41-178, gnl|monDom2|scaffold_12 (11667015-11667178) | |
| 41-178, gnl|oryCun1|scaffold_142326 (4257-4082) | |
| 41-178, gnl|panTro1|chr16 (31564300-31564485) | |
| 41-178, gnl|rheMac2|chr7 (12080242-12080427) | |
| 41-178, gnl|rn3|chr3 (98386027-98385845) | |
| 41-178, gnl|tetNig1|chr10 (4171831-4171973) | |
| 41-178, gnl|xenTro1|scaffold_572 (661207-661367) | |
| 220-350, gnl|bosTau2|chr10 (17695199-17695069) | |
| 220-350, gnl|canFam2|chr30 (4180140-4180022) | |
| 220-350, gnl|danRer3|chr20 (37104079-37104197) | |
| 220-350, gnl|dasNov1|scaffold_4772 (1987-1862) | |
| 220-350, gnl|echTel1|scaffold_320511 (85660-85781) | |
| 220-350, gnl|fr1|chrUn (81748924-81749042) | |
| 220-350, gnl|galGal2|chr5 (27062271-27062153) | |
| 220-350, gnl|hg17|chr15 (31933047-31933165) | |
| 220-350, gnl|Hg17|chr15 (31933046-31933176) | |
| 220-350, gnl|loxAfr1|scaffold_118216 (462-344) | |
| 220-350, gnl|mm7|chr2 (112491379-112491261) | |
| 220-350, gnl|Mm7|chr2 (112491378-112491248) | |
| 220-350, gnl|monDom2|scaffold_12 (11670046-11670164) | |
| 220-350, gnl|oryCun1|scaffold_110477 (15831-15713) | |
| 220-350, gnl|panTro1|chr16 (31569678-31569796) | |
| 220-350, gnl|rheMac2|chr7 (12085418-12085536) | |
| 220-350, gnl|rn3|chr3 (98381816-98381698) | |
| 220-350, gnl|tetNig1|chr10 (4172160-4172278) | |
| 220-350, gnl|xenTro1|scaffold_117 (76338-76456) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 41-178, gnl|bosTau2|chr10 (17700114-17699977) | |
| 41-178, gnl|canFam2|chr30 (4185418-4185233) | |
| 41-178, gnl|danRer3|chr20 (37101695-37101857) | |
| 41-178, gnl|dasNov1|scaffold_168843 (4389-4549) | |
| 41-178, gnl|echTel1|scaffold_239610 (709-531) | |
| 41-178, gnl|fr1|chrUn (81748582-81748734) | |
| 41-178, gnl|galGal2|chr5 (27066994-27066852) | |
| 41-178, gnl|hg17|chr15 (31927764-31927949) | |
| 41-178, gnl|Hg17|chr15 (31927777-31927914) | |
| 41-178, gnl|loxAfr1|scaffold_118216 (1493-1312) | |
| 41-178, gnl|mm7|chr2 (112495570-112495385) | |
| 41-178, gnl|Mm7|chr2 (112495555-112495418) | |
| 41-178, gnl|monDom2|scaffold_12 (11667015-11667178) | |
| 41-178, gnl|oryCun1|scaffold_142326 (4257-4082) | |
| 41-178, gnl|panTro1|chr16 (31564300-31564485) | |
| 41-178, gnl|rheMac2|chr7 (12080242-12080427) | |
| 41-178, gnl|rn3|chr3 (98386027-98385845) | |
| 41-178, gnl|tetNig1|chr10 (4171831-4171973) | |
| 41-178, gnl|xenTro1|scaffold_572 (661207-661367) | |
| 220-350, gnl|bosTau2|chr10 (17695199-17695069) | |
| 220-350, gnl|canFam2|chr30 (4180140-4180022) | |
| 220-350, gnl|danRer3|chr20 (37104079-37104197) | |
| 220-350, gnl|dasNov1|scaffold_4772 (1987-1862) | |
| 220-350, gnl|echTel1|scaffold_320511 (85660-85781) | |
| 220-350, gnl|fr1|chrUn (81748924-81749042) | |
| 220-350, gnl|galGal2|chr5 (27062271-27062153) | |
| 220-350, gnl|hg17|chr15 (31933047-31933165) | |
| 220-350, gnl|Hg17|chr15 (31933046-31933176) | |
| 220-350, gnl|loxAfr1|scaffold_118216 (462-344) | |
| 220-350, gnl|mm7|chr2 (112491379-112491261) | |
| 220-350, gnl|Mm7|chr2 (112491378-112491248) | |
| 220-350, gnl|monDom2|scaffold_12 (11670046-11670164) | |
| 220-350, gnl|oryCun1|scaffold_110477 (15831-15713) | |
| 220-350, gnl|panTro1|chr16 (31569678-31569796) | |
| 220-350, gnl|rheMac2|chr7 (12085418-12085536) | |
| 220-350, gnl|rn3|chr3 (98381816-98381698) | |
| 220-350, gnl|tetNig1|chr10 (4172160-4172278) | |
| 220-350, gnl|xenTro1|scaffold_117 (76338-76456) |