Non-Coding RNA Search

Pig2-29G24

Sequence:


               
               GGAGATCTCTGAGTTTCCAATCCTAGTCCCTTTCCAACCTGTAGATGCCATGAGAGAGGC
TCAAGCAACTAGCACCCTGGAAGTTCCACCTGTACCTGAGACTCAGCGGGGAACCATGGG
ACATAATGAGAGTATTCAAGTCTTACAGCCCCTGATGCCAGTCCTCTGTCAGCCCCCAGA
TTCTCTGTCAGAACCCCAGAAAGTAAGCCCTGAAGGTGGACCTTCTGTGACCAAGGACTT
CTGGGAAACCTTAGGGCACAAAGAGAATCCTAGGGCCTCTGGGCCTCCAATACCAGCCCC
TTACCCTCCTCCACATCCCCTACCAGAACTCCAAGGAGGCAGTTCCCTTGGAGAGCCAAC
TGATTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGAGATCTCTGAGTTTCCAATCCTAGTCCCTTTCCAACCTGTAGATGCCATGAGAGAGGC
TCAAGCAACTAGCACCCTGGAAGTTCCACCTGTACCTGAGACTCAGCGGGGAACCATGGG
ACATAATGAGAGTATTCAAGTCTTACAGCCCCTGATGCCAGTCCTCTGTCAGCCCCCAGA
TTCTCTGTCAGAACCCCAGAAAGTAAGCCCTGAAGGTGGACCTTCTGTGACCAAGGACTT
CTGGGAAACCTTAGGGCACAAAGAGAATCCTAGGGCCTCTGGGCCTCCAATACCAGCCCC
TTACCCTCCTCCACATCCCCTACCAGAACTCCAAGGAGGCAGTTCCCTTGGAGAGCCAAC
TGATTA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               162-281, - strand, RNAz p=0.888464

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               162-281, - strand, RNAz p=0.888464

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               3-362, gnl|bosTau2|chr8 (27844459-27844818)
               

               
               3-362, gnl|Hg17|chr9 (35033546-35033851)
               

               
               3-362, gnl|Mm7|chr4 (42985744-42986097)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               3-362, gnl|bosTau2|chr8 (27844459-27844818)
               

               
               3-362, gnl|Hg17|chr9 (35033546-35033851)
               

               
               3-362, gnl|Mm7|chr4 (42985744-42986097)

	3-362, gnl\|bosTau2\|chr8 (27844459-27844818)
	3-362, gnl\|Hg17\|chr9 (35033546-35033851)
	3-362, gnl\|Mm7\|chr4 (42985744-42986097)