Non-Coding RNA Search

Pig2-2I17

Sequence:


               
               CCGGCGCGGCCGTGCGCGGGGCCGTCTGCGGGCTGGTGGTCTCCGCCATCGCCCTGGGCT
GCGTGCTGATGCTCGGGCACTCGGTCCTACGCCTCCCCCTCTGGGGCTTCCTCCTGCTGC
TGCTGTGCAGCAGCGTCACGTTTCTGCTCAGTCTCCTCGTCCTGGGGGCCCACCAGCAGC
AACGCCTGAAGGACACCTTCCAGATGCCCCTGGTGCCCCTGATTCCAGCTCTGAGCATCG
TCCTCAACTTCTGCCTCATGCTGAAGCTGAGCTACCTGACCTGGGTGCGCTTCACCATCT
GGCTGCTGATAGGACTCTTGGTGTATTTCGGCTACGGCATCTGGCACAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGGCGCGGCCGTGCGCGGGGCCGTCTGCGGGCTGGTGGTCTCCGCCATCGCCCTGGGCT
GCGTGCTGATGCTCGGGCACTCGGTCCTACGCCTCCCCCTCTGGGGCTTCCTCCTGCTGC
TGCTGTGCAGCAGCGTCACGTTTCTGCTCAGTCTCCTCGTCCTGGGGGCCCACCAGCAGC
AACGCCTGAAGGACACCTTCCAGATGCCCCTGGTGCCCCTGATTCCAGCTCTGAGCATCG
TCCTCAACTTCTGCCTCATGCTGAAGCTGAGCTACCTGACCTGGGTGCGCTTCACCATCT
GGCTGCTGATAGGACTCTTGGTGTATTTCGGCTACGGCATCTGGCACAG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               81-200, - strand, RNAz p=0.989581

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               81-200, - strand, RNAz p=0.989581

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-236, gnl|bosTau2|chr17 (45735581-45735344)
               

               
               1-236, gnl|Hg17|chr22 (19708756-19708519)
               

               
               1-236, gnl|Mm7|chr16 (17123881-17123646)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-236, gnl|bosTau2|chr17 (45735581-45735344)
               

               
               1-236, gnl|Hg17|chr22 (19708756-19708519)
               

               
               1-236, gnl|Mm7|chr16 (17123881-17123646)

	1-236, gnl\|bosTau2\|chr17 (45735581-45735344)
	1-236, gnl\|Hg17\|chr22 (19708756-19708519)
	1-236, gnl\|Mm7\|chr16 (17123881-17123646)