Non-Coding RNA Search

Pig2-2K06

Sequence:


               
               CCGGGGAGGACCTGCTTATCTCTGATTTCTGGAGTTTAGCGCTAGAAACCATCAAAGGTG
TCTTAGGAAGCATCTGGAACAACTGAAGGCCCCTGTGGGGACTCTTTCAGAAGCCTTTGC
AAGCCTGCATCTTGACCCATCACCAGATGAGTCAGATGTGGCCCCTGGCTCCATCTCAGA
GGAGACCCTGGTCCAAGGAGCCTGCCATTTGAAGTGTGTGTGTTATGGCATTGGGAACTT
TGCCACCTGCGTCATTGCCAGAAACCAACTAGCATTTTTGCTTCTGTTCTTGGAAAAGTG
CCAGGAAGGAAAGCGGAGTGTTTGCGGCGAACCCACTGTCTTCTACATGCTCCACTGTGG
GACGGCGCTGTACAACAACCTCCTGTGGAGTAACTGGTCAGTAGAGGCCCTTTCCAAGTT
GGTCATCATCGGAAATAGTTTCAGAGGACTTGAGGAGAGGTTGTTGACAAGGATTTTGCA
GAAAAATATCTGTATGTTGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGGGGAGGACCTGCTTATCTCTGATTTCTGGAGTTTAGCGCTAGAAACCATCAAAGGTG
TCTTAGGAAGCATCTGGAACAACTGAAGGCCCCTGTGGGGACTCTTTCAGAAGCCTTTGC
AAGCCTGCATCTTGACCCATCACCAGATGAGTCAGATGTGGCCCCTGGCTCCATCTCAGA
GGAGACCCTGGTCCAAGGAGCCTGCCATTTGAAGTGTGTGTGTTATGGCATTGGGAACTT
TGCCACCTGCGTCATTGCCAGAAACCAACTAGCATTTTTGCTTCTGTTCTTGGAAAAGTG
CCAGGAAGGAAAGCGGAGTGTTTGCGGCGAACCCACTGTCTTCTACATGCTCCACTGTGG
GACGGCGCTGTACAACAACCTCCTGTGGAGTAACTGGTCAGTAGAGGCCCTTTCCAAGTT
GGTCATCATCGGAAATAGTTTCAGAGGACTTGAGGAGAGGTTGTTGACAAGGATTTTGCA
GAAAAATATCTGTATGTTGCA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|6572162|emb|CAB62929.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|6572162|emb|CAB62929.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               44-241, - strand, RNAz p=0.993972

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               44-241, - strand, RNAz p=0.993972

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               44-305, gnl|bosTau2|chr14 (9524360-9524622)
               

               
               44-305, gnl|Hg17|chr22 (25208547-25208809)
               

               
               44-305, gnl|Mm7|chr5 (111526628-111526399)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               44-305, gnl|bosTau2|chr14 (9524360-9524622)
               

               
               44-305, gnl|Hg17|chr22 (25208547-25208809)
               

               
               44-305, gnl|Mm7|chr5 (111526628-111526399)

	44-305, gnl\|bosTau2\|chr14 (9524360-9524622)
	44-305, gnl\|Hg17\|chr22 (25208547-25208809)
	44-305, gnl\|Mm7\|chr5 (111526628-111526399)