Pig2-30I02
|
GCGGACGCGTGGGTGCGGCGGATCCCTGAGGAATACTCTCTGGGACGGATGGCAGAAGGC
CTGGGCCACCGGGACCCCATCATGAAGGTGCTGTCCATCCGAGGACTGGTCATCCTGGCC
CGCAGGACTGAGAAGACTGCCAAGGTGCAGGCCCTCCTGCCTTCCATGGTGAAGGGTCTG
AAGAGTGTGGACGGGCTGCTGGTGGTGGAGGCGGTCCACAGCCTCAAGACCCTCTTCAAG
GGGCAGGACCGGAAGCTGACGGATAGCTCGGTCTATGTGGAGATGCTGCAGGTCCTGCTG
CCACACTTCAGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCGGACGCGTGGGTGCGGCGGATCCCTGAGGAATACTCTCTGGGACGGATGGCAGAAGGC
CTGGGCCACCGGGACCCCATCATGAAGGTGCTGTCCATCCGAGGACTGGTCATCCTGGCC
CGCAGGACTGAGAAGACTGCCAAGGTGCAGGCCCTCCTGCCTTCCATGGTGAAGGGTCTG
AAGAGTGTGGACGGGCTGCTGGTGGTGGAGGCGGTCCACAGCCTCAAGACCCTCTTCAAG
GGGCAGGACCGGAAGCTGACGGATAGCTCGGTCTATGTGGAGATGCTGCAGGTCCTGCTG
CCACACTTCAGT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
149-256, - strand, RNAmicro p=0.999994 |
|
155-248, + strand, RNAmicro p=0.999923 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
149-256, - strand, RNAmicro p=0.999994 |
|
155-248, + strand, RNAmicro p=0.999923 |
Human gene identifier and UTR site,
human gene reading direction
|
134-312, gnl|bosTau2|chr3 (60418891-60418713) |
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134-312, gnl|canFam2|chr5 (57446168-57445649) |
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134-312, gnl|dasNov1|scaffold_27140 (7491-7990) |
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134-312, gnl|echTel1|scaffold_300013 (2048-1567) |
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134-312, gnl|hg17|chr1 (54878463-54878979) |
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134-312, gnl|Hg17|chr1 (54878835-54879013) |
|
134-312, gnl|loxAfr1|scaffold_7811 (59291-58773) |
|
134-312, gnl|mm7|chr4 (106068429-106067993) |
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134-312, gnl|Mm7|chr4 (106068135-106067957) |
|
134-312, gnl|monDom2|scaffold_40 (21282452-21281771) |
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134-312, gnl|panTro1|chr1_random (70187070-70187586) |
|
134-312, gnl|rheMac2|chr1 (57569428-57569944) |
|
134-312, gnl|rn3|chr5 (127772239-127771736) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
134-312, gnl|bosTau2|chr3 (60418891-60418713) |
|
134-312, gnl|canFam2|chr5 (57446168-57445649) |
|
134-312, gnl|dasNov1|scaffold_27140 (7491-7990) |
|
134-312, gnl|echTel1|scaffold_300013 (2048-1567) |
|
134-312, gnl|hg17|chr1 (54878463-54878979) |
|
134-312, gnl|Hg17|chr1 (54878835-54879013) |
|
134-312, gnl|loxAfr1|scaffold_7811 (59291-58773) |
|
134-312, gnl|mm7|chr4 (106068429-106067993) |
|
134-312, gnl|Mm7|chr4 (106068135-106067957) |
|
134-312, gnl|monDom2|scaffold_40 (21282452-21281771) |
|
134-312, gnl|panTro1|chr1_random (70187070-70187586) |
|
134-312, gnl|rheMac2|chr1 (57569428-57569944) |
|
134-312, gnl|rn3|chr5 (127772239-127771736) |
