Non-Coding RNA Search

Pig2-30M23

Sequence:


               
               GCAGCAGAGCCTCGGCTGTTTCGGAGGTCTTGGGGTGCCTTGTCTGGGCAGTGGTGGAGT
GGCTGCCCCTCCCACCCTGGCACCGATGGGGCCTGGCCTGCCATCCACCCATCCTCGCCA
GAATGTAAGCATCTCCGTTGAACCGACTCCCTGCCCTTACCCTACCTCTGAGTTTGTCCA
TTTTTATTTCCTGAAGAGAAGGGACTGGCAAGAGGGCCCGGGCCCCAGCCCAAGGGTGGA
CAGGGGGCCAGGGGCTCCTGAACAGATAGGAAGGACATTTGAGCAGAGCCAAGTGAAAGG
AATTACAACC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCAGCAGAGCCTCGGCTGTTTCGGAGGTCTTGGGGTGCCTTGTCTGGGCAGTGGTGGAGT
GGCTGCCCCTCCCACCCTGGCACCGATGGGGCCTGGCCTGCCATCCACCCATCCTCGCCA
GAATGTAAGCATCTCCGTTGAACCGACTCCCTGCCCTTACCCTACCTCTGAGTTTGTCCA
TTTTTATTTCCTGAAGAGAAGGGACTGGCAAGAGGGCCCGGGCCCCAGCCCAAGGGTGGA
CAGGGGGCCAGGGGCTCCTGAACAGATAGGAAGGACATTTGAGCAGAGCCAAGTGAAAGG
AATTACAACC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               150-298, + strand, RNAz p=0.938564

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               150-298, + strand, RNAz p=0.938564

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-310, gnl|bosTau2|chr18 (44825828-44825519)
               

               
               1-310, gnl|Hg17|chr19 (47284901-47284592)
               

               
               1-310, gnl|Mm7|chr7 (21879635-21879331)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-310, gnl|bosTau2|chr18 (44825828-44825519)
               

               
               1-310, gnl|Hg17|chr19 (47284901-47284592)
               

               
               1-310, gnl|Mm7|chr7 (21879635-21879331)

	1-310, gnl\|bosTau2\|chr18 (44825828-44825519)
	1-310, gnl\|Hg17\|chr19 (47284901-47284592)
	1-310, gnl\|Mm7\|chr7 (21879635-21879331)