Non-Coding RNA Search

Pig2-32J08

Sequence:


               
               GGCGGCACGGAGAGCACGGGCGCTTCACGGAGGAGGAGCAACTGCAGCTGCGGGAGATCC
TGGAGCGGCGGGGGTCCGGGGAGCTGTACGAGCACGAGAAGGACCTGGTGTGGAAGATGC
GGCACGAGGTCCAGGAGCACTTCCCCGAGGCACTGGCCCGGCTGCTGCTGGTCACCAAGT
GGAACAGGCACGAGGACGTGGCCCAGATGCTCTATCTGCTGTGCTCCTGGCCCGAGCTGC
CCGTCCTGAGTGCCCTGGAGCTGCTGGACTTCAGCTTCCCTGACCGCCACGTGGGCTCCT
TCGCCATCAAGTCCCTGCGGAAACTGACGGACGATGAGCTTTTCCAATACCTGCTGCAGC
TGGTGCAGGTGCTCAAGTACG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCGGCACGGAGAGCACGGGCGCTTCACGGAGGAGGAGCAACTGCAGCTGCGGGAGATCC
TGGAGCGGCGGGGGTCCGGGGAGCTGTACGAGCACGAGAAGGACCTGGTGTGGAAGATGC
GGCACGAGGTCCAGGAGCACTTCCCCGAGGCACTGGCCCGGCTGCTGCTGGTCACCAAGT
GGAACAGGCACGAGGACGTGGCCCAGATGCTCTATCTGCTGTGCTCCTGGCCCGAGCTGC
CCGTCCTGAGTGCCCTGGAGCTGCTGGACTTCAGCTTCCCTGACCGCCACGTGGGCTCCT
TCGCCATCAAGTCCCTGCGGAAACTGACGGACGATGAGCTTTTCCAATACCTGCTGCAGC
TGGTGCAGGTGCTCAAGTACG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               37-155, + strand, RNAz p=0.617007

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               37-155, + strand, RNAz p=0.617007

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               37-209, gnl|bosTau2|chr16 (30882783-30882955)
               

               
               37-209, gnl|Hg17|chr1 (9715064-9715236)
               

               
               37-209, gnl|Mm7|chr4 (148645047-148644875)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               37-209, gnl|bosTau2|chr16 (30882783-30882955)
               

               
               37-209, gnl|Hg17|chr1 (9715064-9715236)
               

               
               37-209, gnl|Mm7|chr4 (148645047-148644875)

	37-209, gnl\|bosTau2\|chr16 (30882783-30882955)
	37-209, gnl\|Hg17\|chr1 (9715064-9715236)
	37-209, gnl\|Mm7\|chr4 (148645047-148644875)