Non-Coding RNA Search

Pig2-34A02

Sequence:


               
               GGCTAAGTGCCACGAGAGGTACGTACAAAGTGCCTGGAGGACTCAACGGAGATAAATGTA
TCCAGTTGGCAGGATCAAGACGGATGTGCGAACGAGGCGGCTTGTGAGCTGAGCTCTGAA
GGATGGACGGGATTTTGTCAGTAAAAGGGGGCTACAGGGCTTTCTAAATATAGAGAATAT
TATAAGCAAAGTTCCAACCGCAGAAAAATGCATGCTCCTTTGAGAAACAGTCTGGTTTGG
CTGAAGTGTAATGTACACATCACAGAGGTGTACTGGGAGGTACGGATGGGAAAGACGACG
CTGCCTGTGTTTTAACCCTTTCAGTCATCTACCCTCAGAGTTTTCAACTCTTAAAAGTGG
CATGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGCTAAGTGCCACGAGAGGTACGTACAAAGTGCCTGGAGGACTCAACGGAGATAAATGTA
TCCAGTTGGCAGGATCAAGACGGATGTGCGAACGAGGCGGCTTGTGAGCTGAGCTCTGAA
GGATGGACGGGATTTTGTCAGTAAAAGGGGGCTACAGGGCTTTCTAAATATAGAGAATAT
TATAAGCAAAGTTCCAACCGCAGAAAAATGCATGCTCCTTTGAGAAACAGTCTGGTTTGG
CTGAAGTGTAATGTACACATCACAGAGGTGTACTGGGAGGTACGGATGGGAAAGACGACG
CTGCCTGTGTTTTAACCCTTTCAGTCATCTACCCTCAGAGTTTTCAACTCTTAAAAGTGG
CATGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               116-235, + strand, RNAz p=0.518727

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               116-235, + strand, RNAz p=0.518727

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-365, gnl|bosTau2|chr4 (47311668-47312038)
               

               
               2-365, gnl|Hg17|chr7 (40210263-40209894)
               

               
               2-365, gnl|Mm7|chr13 (16750765-16751108)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-365, gnl|bosTau2|chr4 (47311668-47312038)
               

               
               2-365, gnl|Hg17|chr7 (40210263-40209894)
               

               
               2-365, gnl|Mm7|chr13 (16750765-16751108)

	2-365, gnl\|bosTau2\|chr4 (47311668-47312038)
	2-365, gnl\|Hg17\|chr7 (40210263-40209894)
	2-365, gnl\|Mm7\|chr13 (16750765-16751108)