Non-Coding RNA Search

Pig2-34E12

Sequence:


               
               GTGAATGCACCTGCTGGGTGCTATGCACCGTCAGGGAGACCTGACCACCCTTGCCGCCCG
GGGCTGTGCTCTGCACCACCAGACGCTGCGTAGGGAGAGCCTGGAGCCAGAAGGGAGAAG
GACCACAGTTCACTGACAACAGCCTGTATGATTTTAATGAGCTGCAGTCGCTCCCCCACT
TCACAGAGGGTGACAGTGAGGCTTGGGACCAGCAGAGGTACTTGCCCCAGATCCTGGAGC
CCAGAAGTACAGGGCCAGAGTTTGTGTCCAGGGAGCCTGGCTCCAGAGGCTGACAGGAGT
TTGTCCCAGCCTCTGCTGGGTTCCTGGCACCTGGTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGAATGCACCTGCTGGGTGCTATGCACCGTCAGGGAGACCTGACCACCCTTGCCGCCCG
GGGCTGTGCTCTGCACCACCAGACGCTGCGTAGGGAGAGCCTGGAGCCAGAAGGGAGAAG
GACCACAGTTCACTGACAACAGCCTGTATGATTTTAATGAGCTGCAGTCGCTCCCCCACT
TCACAGAGGGTGACAGTGAGGCTTGGGACCAGCAGAGGTACTTGCCCCAGATCCTGGAGC
CCAGAAGTACAGGGCCAGAGTTTGTGTCCAGGGAGCCTGGCTCCAGAGGCTGACAGGAGT
TTGTCCCAGCCTCTGCTGGGTTCCTGGCACCTGGTGTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               11-120, - strand, RNAz p=0.645321

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               11-120, - strand, RNAz p=0.645321

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

Help | Less info


               
               1-150, gnl|bosTau2|chr7 (7824814-7824665)
               

               
               1-150, gnl|canFam2|chr20 (51505658-51505515)
               

               
               1-150, gnl|echTel1|scaffold_301790 (3093-2946)
               

               
               1-150, gnl|hg17|chr19 (13953918-13954063)
               

               
               1-150, gnl|Hg17|chr19 (13953941-13954091)
               

               
               1-150, gnl|mm7|chr8 (82663859-82663728)
               

               
               1-150, gnl|Mm7|chr8 (82663836-82663708)
               

               
               1-150, gnl|monDom2|scaffold_159 (1230164-1230301)
               

               
               1-150, gnl|oryCun1|scaffold_183153 (3624-3486)
               

               
               1-150, gnl|panTro1|chr20 (14584474-14584619)
               

               
               1-150, gnl|rheMac2|chr19 (13673466-13673611)
               

               
               1-150, gnl|rn3|chr19 (25766651-25766784)
               

               
               1-150, gnl|xenTro1|scaffold_781 (66293-66435)

Aligned organism(s): 13 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-150, gnl|bosTau2|chr7 (7824814-7824665)
               

               
               1-150, gnl|canFam2|chr20 (51505658-51505515)
               

               
               1-150, gnl|echTel1|scaffold_301790 (3093-2946)
               

               
               1-150, gnl|hg17|chr19 (13953918-13954063)
               

               
               1-150, gnl|Hg17|chr19 (13953941-13954091)
               

               
               1-150, gnl|mm7|chr8 (82663859-82663728)
               

               
               1-150, gnl|Mm7|chr8 (82663836-82663708)
               

               
               1-150, gnl|monDom2|scaffold_159 (1230164-1230301)
               

               
               1-150, gnl|oryCun1|scaffold_183153 (3624-3486)
               

               
               1-150, gnl|panTro1|chr20 (14584474-14584619)
               

               
               1-150, gnl|rheMac2|chr19 (13673466-13673611)
               

               
               1-150, gnl|rn3|chr19 (25766651-25766784)
               

               
               1-150, gnl|xenTro1|scaffold_781 (66293-66435)

	1-150, gnl\|bosTau2\|chr7 (7824814-7824665)
	1-150, gnl\|canFam2\|chr20 (51505658-51505515)
	1-150, gnl\|echTel1\|scaffold_301790 (3093-2946)
	1-150, gnl\|hg17\|chr19 (13953918-13954063)
	1-150, gnl\|Hg17\|chr19 (13953941-13954091)
	1-150, gnl\|mm7\|chr8 (82663859-82663728)
	1-150, gnl\|Mm7\|chr8 (82663836-82663708)
	1-150, gnl\|monDom2\|scaffold_159 (1230164-1230301)
	1-150, gnl\|oryCun1\|scaffold_183153 (3624-3486)
	1-150, gnl\|panTro1\|chr20 (14584474-14584619)
	1-150, gnl\|rheMac2\|chr19 (13673466-13673611)
	1-150, gnl\|rn3\|chr19 (25766651-25766784)
	1-150, gnl\|xenTro1\|scaffold_781 (66293-66435)