Non-Coding RNA Search

Pig2-34K11

Sequence:


               
               GTTTTTAACAAAGAAGGAAAATGTTTCAAAGAGCATGATGTTGTCTTCTTTATCAGTGTG
TTTTTCCTCCCCCAGAGTTTTCCTGCGTGCCATAAACCAGTTTGCTGAGGTTCTCACAAA
ATTCTTCATGGATCAGGCAAGCTTTGAACTTCAGGTAAGCACGCAGCTCACCTACAAGTT
CCTTGAGTTCTCAGCCAAAGCAAGACAACAGTTTCACTTGAGGAAACAGCGCCTCAGACT
TTATTATAACACAAAAGCACAGATACACACATGCTATTGCAAGTAGGCACACGATGCCTT
ACCAATGGTTTAGTGTCTAAGAAGCCAGTTGTACACATACCTGTTTGAAAGTCCAAAGTA
ACTGCAACACAGATGACCACTAGCTCCATCGTCATTCATTCATTCATCCCACAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTTTTTAACAAAGAAGGAAAATGTTTCAAAGAGCATGATGTTGTCTTCTTTATCAGTGTG
TTTTTCCTCCCCCAGAGTTTTCCTGCGTGCCATAAACCAGTTTGCTGAGGTTCTCACAAA
ATTCTTCATGGATCAGGCAAGCTTTGAACTTCAGGTAAGCACGCAGCTCACCTACAAGTT
CCTTGAGTTCTCAGCCAAAGCAAGACAACAGTTTCACTTGAGGAAACAGCGCCTCAGACT
TTATTATAACACAAAAGCACAGATACACACATGCTATTGCAAGTAGGCACACGATGCCTT
ACCAATGGTTTAGTGTCTAAGAAGCCAGTTGTACACATACCTGTTTGAAAGTCCAAAGTA
ACTGCAACACAGATGACCACTAGCTCCATCGTCATTCATTCATTCATCCCACAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               90-209, + strand, RNAz p=0.649776

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               90-209, + strand, RNAz p=0.649776

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of AK126249, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of AK126249, +

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               17-406, gnl|bosTau2|chr8 (38694095-38693704)
               

               
               17-406, gnl|Hg17|chr8 (25278002-25278635)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               17-406, gnl|bosTau2|chr8 (38694095-38693704)
               

               
               17-406, gnl|Hg17|chr8 (25278002-25278635)

	17-406, gnl\|bosTau2\|chr8 (38694095-38693704)
	17-406, gnl\|Hg17\|chr8 (25278002-25278635)