Non-Coding RNA Search

Pig2-34M03

Sequence:


               
               GCGGACGCGTGGGTCAGCTATGACTCCCACGTTTGTTTGAGAATCATTGAAGCTGCTTGA
ATGGAACTGGGATATCCTTTGTTCCCACTGATTTGGAAACAAATGACTCAGGAAAAAAAG
TTTACTTTGCTGCTAAATGCCATATGCAGATGAACGTATTGCTGATTAAATTAAACCAAG
GATCTGAAGACTTTTTCAAGTCATAGAAAGAATGCTCTCGTTGTTACGGTACATGTTCCA
ATTTGCCCTCCCGTTTTCGTTTATCCTACTGGGCTTGGGTCCGACATAGGGTTACTTACG
TCACACACCCGAGTCTTCAGGAATAATAAAGCGTAATCAATACGGGAGAGGCAGCATCAA
AGACGACAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGACGCGTGGGTCAGCTATGACTCCCACGTTTGTTTGAGAATCATTGAAGCTGCTTGA
ATGGAACTGGGATATCCTTTGTTCCCACTGATTTGGAAACAAATGACTCAGGAAAAAAAG
TTTACTTTGCTGCTAAATGCCATATGCAGATGAACGTATTGCTGATTAAATTAAACCAAG
GATCTGAAGACTTTTTCAAGTCATAGAAAGAATGCTCTCGTTGTTACGGTACATGTTCCA
ATTTGCCCTCCCGTTTTCGTTTATCCTACTGGGCTTGGGTCCGACATAGGGTTACTTACG
TCACACACCCGAGTCTTCAGGAATAATAAAGCGTAATCAATACGGGAGAGGCAGCATCAA
AGACGACAA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               57-170, + strand, RNAz p=0.926111

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               57-170, + strand, RNAz p=0.926111

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               18-339, gnl|bosTau2|chr13 (62423227-62423546)
               

               
               18-339, gnl|Hg17|chr20 (51917607-51917917)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-339, gnl|bosTau2|chr13 (62423227-62423546)
               

               
               18-339, gnl|Hg17|chr20 (51917607-51917917)

	18-339, gnl\|bosTau2\|chr13 (62423227-62423546)
	18-339, gnl\|Hg17\|chr20 (51917607-51917917)