Non-Coding RNA Search

Pig2-38C22

Sequence:


               
               GCCGGGATTCCCCCCTATACCTGGCCTGGAGCCCACTCTGGGTCCTGAGGAGGATGTGGT
GGCAGCTACTTTAGCAGCTGCCCAGAAACTGGCCTCCTCAGAGGATACAGCCCCAGCAGA
GGACGATGAGGATGCGGACAAGGATGAGCTCCCAACCCAGGCCCCATTGGCCAAGAAGCC
AGCACAGCCTCGGGTCCCTTCATCCCGGCCCCTGCCTGAGCCCAAGGCCTCGCGTTCTAA
GGAGCTGCTGAGTCCCTCTGTGGGAGAGCAGCTGGCCCTGCTAGAGGCACGGAAGCTGCA
GTACCAGCGGGCAGCCCTGAAGGCCAAGCGCGGCCAGGACCTGGAACAGGCCAAAGCCCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGGGATTCCCCCCTATACCTGGCCTGGAGCCCACTCTGGGTCCTGAGGAGGATGTGGT
GGCAGCTACTTTAGCAGCTGCCCAGAAACTGGCCTCCTCAGAGGATACAGCCCCAGCAGA
GGACGATGAGGATGCGGACAAGGATGAGCTCCCAACCCAGGCCCCATTGGCCAAGAAGCC
AGCACAGCCTCGGGTCCCTTCATCCCGGCCCCTGCCTGAGCCCAAGGCCTCGCGTTCTAA
GGAGCTGCTGAGTCCCTCTGTGGGAGAGCAGCTGGCCCTGCTAGAGGCACGGAAGCTGCA
GTACCAGCGGGCAGCCCTGAAGGCCAAGCGCGGCCAGGACCTGGAACAGGCCAAAGCCCA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               5-150, - strand, RNAz p=0.938577

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               5-150, - strand, RNAz p=0.938577

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-150, gnl|bosTau2|chr3 (70217347-70217202)
               

               
               5-150, gnl|Hg17|chr1 (52536155-52536016)
               

               
               5-150, gnl|Mm7|chr4 (108003732-108003865)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-150, gnl|bosTau2|chr3 (70217347-70217202)
               

               
               5-150, gnl|Hg17|chr1 (52536155-52536016)
               

               
               5-150, gnl|Mm7|chr4 (108003732-108003865)

	5-150, gnl\|bosTau2\|chr3 (70217347-70217202)
	5-150, gnl\|Hg17\|chr1 (52536155-52536016)
	5-150, gnl\|Mm7\|chr4 (108003732-108003865)