Pig2-38F10
|
GGTGTGTCGGGTTCCCGGCGAGGGCGGGACTTAGGTGGCCGGGCTTGAAGGACGTGGGGA
CACGGCCAGAGCAACTGGCCCCACAAGCGGACGGGAGCAAAGCCCTTCTGTGCTGACCAA
CCCCCAGGATGGCGGAAGCGCACCAGGCTGTGGCCTTCCAATTCACAGTGACCCCAGAAG
GGGTCGACTTCAGGCTCAGCCGGGAGGCCCTGAAACATATCTACCTGTCCGGGATCAATT
CCTGGAAGAAACGTCTGATTCGCATCAAGAATGGCATCCTCAGGGGGGTGTACCCTGGCA
GCCCCACCAGCTGGCTGGTTGTTGCCTCG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGTGTGTCGGGTTCCCGGCGAGGGCGGGACTTAGGTGGCCGGGCTTGAAGGACGTGGGGA
CACGGCCAGAGCAACTGGCCCCACAAGCGGACGGGAGCAAAGCCCTTCTGTGCTGACCAA
CCCCCAGGATGGCGGAAGCGCACCAGGCTGTGGCCTTCCAATTCACAGTGACCCCAGAAG
GGGTCGACTTCAGGCTCAGCCGGGAGGCCCTGAAACATATCTACCTGTCCGGGATCAATT
CCTGGAAGAAACGTCTGATTCGCATCAAGAATGGCATCCTCAGGGGGGTGTACCCTGGCA
GCCCCACCAGCTGGCTGGTTGTTGCCTCG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
110-269, gnl|bosTau2|chr5 (75695267-75695426) |
|
110-269, gnl|canFam2|chr10 (19725499-19725334) |
|
110-269, gnl|danRer3|chr18 (6607285-6607437) |
|
110-269, gnl|dasNov1|scaffold_35593 (2471-2323) |
|
110-269, gnl|echTel1|scaffold_300952 (10452-10282) |
|
110-269, gnl|fr1|chrUn (73503164-73503003) |
|
110-269, gnl|hg17|chr22 (49306347-49306516) |
|
110-269, gnl|Hg17|chr22 (49306507-49306348) |
|
110-269, gnl|mm7|chr15 (89508065-89508231) |
|
110-269, gnl|Mm7|chr15 (89508225-89508066) |
|
110-269, gnl|monDom2|scaffold_119 (1121125-1121294) |
|
110-269, gnl|oryCun1|scaffold_189285 (3176-3009) |
|
110-269, gnl|panTro1|chr23 (49798925-49799094) |
|
110-269, gnl|rheMac2|chr10 (94604031-94604200) |
|
110-269, gnl|rn3|chr7 (127779757-127779926) |
|
110-269, gnl|tetNig1|chr13 (4116623-4116480) |
|
110-269, gnl|xenTro1|scaffold_1088 (156597-156424) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
110-269, gnl|bosTau2|chr5 (75695267-75695426) |
|
110-269, gnl|canFam2|chr10 (19725499-19725334) |
|
110-269, gnl|danRer3|chr18 (6607285-6607437) |
|
110-269, gnl|dasNov1|scaffold_35593 (2471-2323) |
|
110-269, gnl|echTel1|scaffold_300952 (10452-10282) |
|
110-269, gnl|fr1|chrUn (73503164-73503003) |
|
110-269, gnl|hg17|chr22 (49306347-49306516) |
|
110-269, gnl|Hg17|chr22 (49306507-49306348) |
|
110-269, gnl|mm7|chr15 (89508065-89508231) |
|
110-269, gnl|Mm7|chr15 (89508225-89508066) |
|
110-269, gnl|monDom2|scaffold_119 (1121125-1121294) |
|
110-269, gnl|oryCun1|scaffold_189285 (3176-3009) |
|
110-269, gnl|panTro1|chr23 (49798925-49799094) |
|
110-269, gnl|rheMac2|chr10 (94604031-94604200) |
|
110-269, gnl|rn3|chr7 (127779757-127779926) |
|
110-269, gnl|tetNig1|chr13 (4116623-4116480) |
|
110-269, gnl|xenTro1|scaffold_1088 (156597-156424) |
