Non-Coding RNA Search

Pig2-3K01

Sequence:


               
               TTTCCATCCAGCTCTGTCTATCCCACCAAGGATGAGGAAAACAATCCCCTTGAGACAGAA
TATGGCCTTTCTGTCTACAAGGACCACCAGATCATCACCATCCAGGAGATGCCAGAGAAG
GCCCCCGCTGGCCAGCTGCCCCGCTCCGTGGACGTCATCCTGGATGATGACTTGGTGGAC
AAAGTGAAGCCCGGTGACCGAGTCCAGGTGGTGGGCACCTACCGCTGCCTTCCTGGAAAG
AAGGGAGGCTACACCTCAGGGACCTTCAGGACTGTCCTGATTGCCTGTAACGTGAAGCAG
ATGAGCAAGGATGCTCAGCCTTCCTTCTCTGCTGAGGATATAGCCAAGATCAAGAAGTTC
AGTAAAACCCGTTCTAAGGATATCTTTGACCAGCTGGCCAGGTCGCTGGCCCCCAGCATC
CATGGCCACGACTACGTCAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTCCATCCAGCTCTGTCTATCCCACCAAGGATGAGGAAAACAATCCCCTTGAGACAGAA
TATGGCCTTTCTGTCTACAAGGACCACCAGATCATCACCATCCAGGAGATGCCAGAGAAG
GCCCCCGCTGGCCAGCTGCCCCGCTCCGTGGACGTCATCCTGGATGATGACTTGGTGGAC
AAAGTGAAGCCCGGTGACCGAGTCCAGGTGGTGGGCACCTACCGCTGCCTTCCTGGAAAG
AAGGGAGGCTACACCTCAGGGACCTTCAGGACTGTCCTGATTGCCTGTAACGTGAAGCAG
ATGAGCAAGGATGCTCAGCCTTCCTTCTCTGCTGAGGATATAGCCAAGATCAAGAAGTTC
AGTAAAACCCGTTCTAAGGATATCTTTGACCAGCTGGCCAGGTCGCTGGCCCCCAGCATC
CATGGCCACGACTACGTCAAG

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               29-270, + strand, RNAz p=0.990657

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               29-270, + strand, RNAz p=0.990657

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               29-270, gnl|bosTau2|chr23 (22197236-22196995)
               

               
               29-270, gnl|Hg17|chr6 (52252358-52252117)
               

               
               29-270, gnl|Mm7|chr1 (21010527-21010286)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               29-270, gnl|bosTau2|chr23 (22197236-22196995)
               

               
               29-270, gnl|Hg17|chr6 (52252358-52252117)
               

               
               29-270, gnl|Mm7|chr1 (21010527-21010286)

	29-270, gnl\|bosTau2\|chr23 (22197236-22196995)
	29-270, gnl\|Hg17\|chr6 (52252358-52252117)
	29-270, gnl\|Mm7\|chr1 (21010527-21010286)