Non-Coding RNA Search

Pig2-3O07

Sequence:


               
               ACAATTTCAAAAGTCTCTGTGCAGTGGAAGCAAAGCTGAGTGCAGATGATGCTTTCATGA
TGGCACCAAAACCCGGTGTGGACTTCAGCCCTTTTGACTTTGCCCACTTTGGATTTCCTT
CAGATAACTCAGGTAAAGAACGCAGCTTCCTGACAAAGCCTTCCCCAAAACTGGGGCGGC
ATGCCTACTCGAGGCCCAAGGTTGACATTCAGAAAATTTGCATAGGAAATAAAAACATCT
TCACTGTCTCGGACCTGAAACCCGACACACAGTACTACTTTGATGTCTTTGTGGCCAACA
GCAACAGCAACACGAGCACTGCCTACGTGGGCACCTTTGCCCGGACCAAGGAAGAAGCAA
AACAGAAGACAGTTGAGCTGAAAGACGGGAAGGTTACAGATGTGTTTGTTAAAAGGAAGG
GAGCAAAGTTTCTACGATTTGCTCCAGTCTCCTCTCACCAAAAAGTCACCTTCTTTATTC
ACTCTTGTCTGGATGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACAATTTCAAAAGTCTCTGTGCAGTGGAAGCAAAGCTGAGTGCAGATGATGCTTTCATGA
TGGCACCAAAACCCGGTGTGGACTTCAGCCCTTTTGACTTTGCCCACTTTGGATTTCCTT
CAGATAACTCAGGTAAAGAACGCAGCTTCCTGACAAAGCCTTCCCCAAAACTGGGGCGGC
ATGCCTACTCGAGGCCCAAGGTTGACATTCAGAAAATTTGCATAGGAAATAAAAACATCT
TCACTGTCTCGGACCTGAAACCCGACACACAGTACTACTTTGATGTCTTTGTGGCCAACA
GCAACAGCAACACGAGCACTGCCTACGTGGGCACCTTTGCCCGGACCAAGGAAGAAGCAA
AACAGAAGACAGTTGAGCTGAAAGACGGGAAGGTTACAGATGTGTTTGTTAAAAGGAAGG
GAGCAAAGTTTCTACGATTTGCTCCAGTCTCCTCTCACCAAAAAGTCACCTTCTTTATTC
ACTCTTGTCTGGATGCT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|10439799|dbj|BAB15573.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|10439799|dbj|BAB15573.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               360-479, + strand, RNAz p=0.703419

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               360-479, + strand, RNAz p=0.703419

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_024574, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_024574, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-496, gnl|bosTau2|chr6 (1141509-1142004)
               

               
               1-496, gnl|Hg17|chr4 (122316075-122315580)
               

               
               1-496, gnl|Mm7|chr6 (65691147-65691642)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-496, gnl|bosTau2|chr6 (1141509-1142004)
               

               
               1-496, gnl|Hg17|chr4 (122316075-122315580)
               

               
               1-496, gnl|Mm7|chr6 (65691147-65691642)

	1-496, gnl\|bosTau2\|chr6 (1141509-1142004)
	1-496, gnl\|Hg17\|chr4 (122316075-122315580)
	1-496, gnl\|Mm7\|chr6 (65691147-65691642)