Non-Coding RNA Search

Pig2-40I04

Sequence:


               
               GCGGGGGGTGGGAGTTCCATGACCATGGTGGCGTTAAGCTGTAGAGTCTCTGGATGTTGA
CACCTATCTAAGCATCTCTCAGTGGTCCACAGAAATGAGATGAAGGCACAGGAAATTGAA
AGCCACGTTTCAGGGTGGGGTAAGCAGCCTTTGGCGTGGCTGGTGCTCAGTGACCTGTAA
CCACATCCTCCTGTACTCATCTCCCTGTCTTTTTTCTTGCTGCCTGTCCTTCTCTGCTTT
TTCTATGGGATGTGAATTACTTCTGCCCACAGTTCTTCTGTGTCTCAAACTAGAGAAAAA
TAAATGGACTTCATTAGATAAACTTTATTAGACAAGCCGGGTCTCCGTAACTCCCCTTTG
TATCCCTAGCAACCAGCATGGGCTAATTACCCCATAAATGCCTCGTGAATATGTTGAATG
AAGGAAGACAAATTATGAAATTAACAGAACGGGTCCTTGGGTCAGCCTTTCCCTTGAGTT
GCTTAGTGTTTTTCTGGTTTCTGAACAGTCTTCTTCCTGTTAAAATAGGAATAAGCACTT
GAATCTGATCTTATT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGGGGGTGGGAGTTCCATGACCATGGTGGCGTTAAGCTGTAGAGTCTCTGGATGTTGA
CACCTATCTAAGCATCTCTCAGTGGTCCACAGAAATGAGATGAAGGCACAGGAAATTGAA
AGCCACGTTTCAGGGTGGGGTAAGCAGCCTTTGGCGTGGCTGGTGCTCAGTGACCTGTAA
CCACATCCTCCTGTACTCATCTCCCTGTCTTTTTTCTTGCTGCCTGTCCTTCTCTGCTTT
TTCTATGGGATGTGAATTACTTCTGCCCACAGTTCTTCTGTGTCTCAAACTAGAGAAAAA
TAAATGGACTTCATTAGATAAACTTTATTAGACAAGCCGGGTCTCCGTAACTCCCCTTTG
TATCCCTAGCAACCAGCATGGGCTAATTACCCCATAAATGCCTCGTGAATATGTTGAATG
AAGGAAGACAAATTATGAAATTAACAGAACGGGTCCTTGGGTCAGCCTTTCCCTTGAGTT
GCTTAGTGTTTTTCTGGTTTCTGAACAGTCTTCTTCCTGTTAAAATAGGAATAAGCACTT
GAATCTGATCTTATT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               77-175, + strand, RNAz p=0.922705

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               77-175, + strand, RNAz p=0.922705

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               49-555, gnl|bosTau2|chr19 (29562374-29561890)
               

               
               49-555, gnl|Hg17|chr17 (45250428-45251105)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               49-555, gnl|bosTau2|chr19 (29562374-29561890)
               

               
               49-555, gnl|Hg17|chr17 (45250428-45251105)

	49-555, gnl\|bosTau2\|chr19 (29562374-29561890)
	49-555, gnl\|Hg17\|chr17 (45250428-45251105)