Non-Coding RNA Search

Pig2-40P02

Sequence:


               
               GCACAGAAGTGATCAGTAATGAAGGAGGCCGATTCTGTTACCCAGAGTTTTCTAGTGGCG
AAGAGAGTGAGGAAGATGCGCTTTTCAGTAACATGGAGGAGGAGCATGAGAGCTGGGATG
AGAGTGATGAAGAGCTGCTGGCCATGGAGATTCGTATGAGAGGGCAACCTCGCTTTGCCA
ACTTTAGGGCAAACACTTTGTCTCCTGTTCGATTCTTTGTGGACAAAAAATGGAATACTG
TCCCCCTGCGAAATAAATCTCTTCAGAGAATCTGTGCTGTCGACTATGATGACAGTTATG
ATGAAATCCTGAATGGTTATGAAGAGAATTCTGTGGTCTCCTATGGACCAGGAAGCATTC
AGAGCATGGTGTCATCTGACTCCACATCCCCAGATTCCTCTTTAACAGAAGAATCACGGT
CCGAGACAGCCAGTAGTTTATCCCAGAAGGTTTGTAATGGGGGACTATCTCCCGGTAACC
TGGGGGATTCTAAGGACATGAAGGAAAGTGAGCCCAATTGTGAAAGCCCCAGTGGTAATA
ATCAGGAGAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCACAGAAGTGATCAGTAATGAAGGAGGCCGATTCTGTTACCCAGAGTTTTCTAGTGGCG
AAGAGAGTGAGGAAGATGCGCTTTTCAGTAACATGGAGGAGGAGCATGAGAGCTGGGATG
AGAGTGATGAAGAGCTGCTGGCCATGGAGATTCGTATGAGAGGGCAACCTCGCTTTGCCA
ACTTTAGGGCAAACACTTTGTCTCCTGTTCGATTCTTTGTGGACAAAAAATGGAATACTG
TCCCCCTGCGAAATAAATCTCTTCAGAGAATCTGTGCTGTCGACTATGATGACAGTTATG
ATGAAATCCTGAATGGTTATGAAGAGAATTCTGTGGTCTCCTATGGACCAGGAAGCATTC
AGAGCATGGTGTCATCTGACTCCACATCCCCAGATTCCTCTTTAACAGAAGAATCACGGT
CCGAGACAGCCAGTAGTTTATCCCAGAAGGTTTGTAATGGGGGACTATCTCCCGGTAACC
TGGGGGATTCTAAGGACATGAAGGAAAGTGAGCCCAATTGTGAAAGCCCCAGTGGTAATA
ATCAGGAGAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               321-550, - strand, RNAz p=0.991966

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               321-550, - strand, RNAz p=0.991966

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-550, gnl|bosTau2|chr21 (21661669-21661120)
               

               
               1-550, gnl|Hg17|chr15 (75260683-75260134)
               

               
               1-550, gnl|Mm7|chr9 (56287665-56287116)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-550, gnl|bosTau2|chr21 (21661669-21661120)
               

               
               1-550, gnl|Hg17|chr15 (75260683-75260134)
               

               
               1-550, gnl|Mm7|chr9 (56287665-56287116)

	1-550, gnl\|bosTau2\|chr21 (21661669-21661120)
	1-550, gnl\|Hg17\|chr15 (75260683-75260134)
	1-550, gnl\|Mm7\|chr9 (56287665-56287116)