Pig2-41E24
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GAATTTCCACCCATGAGCTGTGGATTAACAGATGAAGAAATAGAACAACAAGTGACATTT CAGGAGAGTGTTAATTCTACTTTGATGCAAAGTGGATATGAAGGCTGGTGGACCCACAGG CGTTTTCTTGAAGTGGCAGTGGTCGTAGACCACACTCGCTATCTTCATCACCAAAGGAAT ACCTCACTTGTACAGAATGAAGTATGCTTTATTTTCCATGGAATAAGTGACTTATTAAAA TCATTGGATATTGATGTGTTTTTAATGGGAATAGAGGTATGGACTGAAGAAAGCTATGTT TCATTACACAGCATAGGAGACGGCCTGAATGGATTTTGCAAATGGAAGAGAAGGGGCTTT AATACTCGTTTGCCCCATGATGTTGCACATATTTTTGTGAAAAAGGATTTTGGTACCAAT GTTGGCTTATCCTTTGTTGGAACAGTATGTAAAACTCATACAAACTGTGGAATTGATAGT TTTCTGAATGGCGACATAACTGATTCAGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GAATTTCCACCCATGAGCTGTGGATTAACAGATGAAGAAATAGAACAACAAGTGACATTT CAGGAGAGTGTTAATTCTACTTTGATGCAAAGTGGATATGAAGGCTGGTGGACCCACAGG CGTTTTCTTGAAGTGGCAGTGGTCGTAGACCACACTCGCTATCTTCATCACCAAAGGAAT ACCTCACTTGTACAGAATGAAGTATGCTTTATTTTCCATGGAATAAGTGACTTATTAAAA TCATTGGATATTGATGTGTTTTTAATGGGAATAGAGGTATGGACTGAAGAAAGCTATGTT TCATTACACAGCATAGGAGACGGCCTGAATGGATTTTGCAAATGGAAGAGAAGGGGCTTT AATACTCGTTTGCCCCATGATGTTGCACATATTTTTGTGAAAAAGGATTTTGGTACCAAT GTTGGCTTATCCTTTGTTGGAACAGTATGTAAAACTCATACAAACTGTGGAATTGATAGT TTTCTGAATGGCGACATAACTGATTCAGCA |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 322-421, - strand, RNAz p=0.90929 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 322-421, - strand, RNAz p=0.90929 |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 1-490, gnl|bosTau2|chr8 (2221850-2221358) | |
| 1-490, gnl|canFam2|chr25 (28530529-28531612) | |
| 1-490, gnl|canFam2|chr25 (28531612-28530453) | |
| 1-490, gnl|canFam2|chr25 (28530895-28531600) | |
| 1-490, gnl|dasNov1|scaffold_7217 (53763-54846) | |
| 1-490, gnl|dasNov1|scaffold_7217 (54846-53686) | |
| 1-490, gnl|dasNov1|scaffold_7217 (54129-54834) | |
| 1-490, gnl|echTel1|scaffold_50233 (1986-899) | |
| 1-490, gnl|echTel1|scaffold_50233 (899-2049) | |
| 1-490, gnl|echTel1|scaffold_50233 (1619-911) | |
| 1-490, gnl|galGal2|chrUn (140103664-140104744) | |
| 1-490, gnl|galGal2|chrUn (140104744-140103579) | |
| 1-490, gnl|galGal2|chrUn (140104013-140104732) | |
| 1-490, gnl|hg17|chr4 (189043375-189044540) | |
| 1-490, gnl|hg17|chr4 (176871395-176872074) | |
| 1-490, gnl|Hg17|chr4 (176313287-176313766) | |
| 1-490, gnl|hg17|chr8 (17371396-17372481) | |
| 1-490, gnl|loxAfr1|scaffold_8274 (2934-1851) | |
| 1-490, gnl|loxAfr1|scaffold_8274 (1851-3011) | |
| 1-490, gnl|loxAfr1|scaffold_8274 (2568-1863) | |
| 1-490, gnl|mm7|chr8 (39470069-39471155) | |
| 1-490, gnl|mm7|chr8 (53849982-53851139) | |
| 1-490, gnl|mm7|chr8 (53850711-53849994) | |
| 1-490, gnl|Mm7|chr8 (39544784-39545272) | |
| 1-490, gnl|monDom2|scaffold_8 (65390912-65391995) | |
| 1-490, gnl|monDom2|scaffold_8 (65391995-65390821) | |
| 1-490, gnl|monDom2|scaffold_8 (65391275-65391964) | |
| 1-490, gnl|oryCun1|scaffold_132223 (13644-12444) | |
| 1-490, gnl|oryCun1|scaffold_146881 (12333-11639) | |
| 1-490, gnl|oryCun1|scaffold_213429 (2875-3962) | |
| 1-490, gnl|panTro1|chr3 (207278052-207279216) | |
| 1-490, gnl|panTro1|chr3 (194834454-194835134) | |
| 1-490, gnl|panTro1|chr7 (18143836-18144924) | |
| 1-490, gnl|rheMac2|chr5 (167655981-167656681) | |
| 1-490, gnl|rheMac2|chr8 (17353608-17354690) | |
| 1-490, gnl|rheMac2|chr8 (17354690-17353529) | |
| 1-490, gnl|rn3|chr16 (54918681-54917595) | |
| 1-490, gnl|rn3|chr16 (51897502-51898635) | |
| 1-490, gnl|rn3|chr16 (39655104-39655818) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-490, gnl|bosTau2|chr8 (2221850-2221358) | |
| 1-490, gnl|canFam2|chr25 (28530529-28531612) | |
| 1-490, gnl|canFam2|chr25 (28531612-28530453) | |
| 1-490, gnl|canFam2|chr25 (28530895-28531600) | |
| 1-490, gnl|dasNov1|scaffold_7217 (53763-54846) | |
| 1-490, gnl|dasNov1|scaffold_7217 (54846-53686) | |
| 1-490, gnl|dasNov1|scaffold_7217 (54129-54834) | |
| 1-490, gnl|echTel1|scaffold_50233 (1986-899) | |
| 1-490, gnl|echTel1|scaffold_50233 (899-2049) | |
| 1-490, gnl|echTel1|scaffold_50233 (1619-911) | |
| 1-490, gnl|galGal2|chrUn (140103664-140104744) | |
| 1-490, gnl|galGal2|chrUn (140104744-140103579) | |
| 1-490, gnl|galGal2|chrUn (140104013-140104732) | |
| 1-490, gnl|hg17|chr4 (189043375-189044540) | |
| 1-490, gnl|hg17|chr4 (176871395-176872074) | |
| 1-490, gnl|Hg17|chr4 (176313287-176313766) | |
| 1-490, gnl|hg17|chr8 (17371396-17372481) | |
| 1-490, gnl|loxAfr1|scaffold_8274 (2934-1851) | |
| 1-490, gnl|loxAfr1|scaffold_8274 (1851-3011) | |
| 1-490, gnl|loxAfr1|scaffold_8274 (2568-1863) | |
| 1-490, gnl|mm7|chr8 (39470069-39471155) | |
| 1-490, gnl|mm7|chr8 (53849982-53851139) | |
| 1-490, gnl|mm7|chr8 (53850711-53849994) | |
| 1-490, gnl|Mm7|chr8 (39544784-39545272) | |
| 1-490, gnl|monDom2|scaffold_8 (65390912-65391995) | |
| 1-490, gnl|monDom2|scaffold_8 (65391995-65390821) | |
| 1-490, gnl|monDom2|scaffold_8 (65391275-65391964) | |
| 1-490, gnl|oryCun1|scaffold_132223 (13644-12444) | |
| 1-490, gnl|oryCun1|scaffold_146881 (12333-11639) | |
| 1-490, gnl|oryCun1|scaffold_213429 (2875-3962) | |
| 1-490, gnl|panTro1|chr3 (207278052-207279216) | |
| 1-490, gnl|panTro1|chr3 (194834454-194835134) | |
| 1-490, gnl|panTro1|chr7 (18143836-18144924) | |
| 1-490, gnl|rheMac2|chr5 (167655981-167656681) | |
| 1-490, gnl|rheMac2|chr8 (17353608-17354690) | |
| 1-490, gnl|rheMac2|chr8 (17354690-17353529) | |
| 1-490, gnl|rn3|chr16 (54918681-54917595) | |
| 1-490, gnl|rn3|chr16 (51897502-51898635) | |
| 1-490, gnl|rn3|chr16 (39655104-39655818) |