Non-Coding RNA Search

Pig2-41P11

Sequence:


               
               TCACGTGCACGTCTTTGCCGAGACAGAGTTCCGCAAAGCCAGGGGCCGGACTCTTGTTCC
CCACTTGTTCCTTTTCTCAATACTTGACAGTTAAACTCAACCTTTATCAAAAACACTGCC
AGCCTCTCTAGTCCTCTTGAAAGGGCCTCTTCAGTTGGGGTCTTCAATCCCATCAAAGAT
GGTCCTGAAAAGACGCTGGGTTTCTTTCTGGGGTGGACCTAAGCGTGAGAGGAGTGGCGC
GCGGAGGGCCGTCTCCCCACGGCCCTCGCATCTCACTGTCCTCCTTCCTGGTGGCCGCTT
TTTATACCAGAGCCCAGTGGGCTGAGCGCGAGGACCTGGGGCCGAGAGCCATGGCCGTGA
CCGGGGCCCGCAGTGCCCAGGCCCGTGGCGGGTGGTTCTCTGTGACCGCTCCCGTCTCGC
GCCTTTTCTCTGGAGTGTTGTTTGTAAGTGCAGGCTGAGTCAGTGTGGGTGTTTGAATGC
CGCTGTTTGCTGTTTTTTAAAGGCCTTCTAGCCCTCCCATGGGGTTACTGCAGCAGGAAT
TCTTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCACGTGCACGTCTTTGCCGAGACAGAGTTCCGCAAAGCCAGGGGCCGGACTCTTGTTCC
CCACTTGTTCCTTTTCTCAATACTTGACAGTTAAACTCAACCTTTATCAAAAACACTGCC
AGCCTCTCTAGTCCTCTTGAAAGGGCCTCTTCAGTTGGGGTCTTCAATCCCATCAAAGAT
GGTCCTGAAAAGACGCTGGGTTTCTTTCTGGGGTGGACCTAAGCGTGAGAGGAGTGGCGC
GCGGAGGGCCGTCTCCCCACGGCCCTCGCATCTCACTGTCCTCCTTCCTGGTGGCCGCTT
TTTATACCAGAGCCCAGTGGGCTGAGCGCGAGGACCTGGGGCCGAGAGCCATGGCCGTGA
CCGGGGCCCGCAGTGCCCAGGCCCGTGGCGGGTGGTTCTCTGTGACCGCTCCCGTCTCGC
GCCTTTTCTCTGGAGTGTTGTTTGTAAGTGCAGGCTGAGTCAGTGTGGGTGTTTGAATGC
CGCTGTTTGCTGTTTTTTAAAGGCCTTCTAGCCCTCCCATGGGGTTACTGCAGCAGGAAT
TCTTA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               103-218, + strand, RNAz p=0.974401

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               103-218, + strand, RNAz p=0.974401

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               31-544, gnl|bosTau2|chr27 (24266444-24265938)
               

               
               31-544, gnl|Hg17|chr8 (19750370-19750994)
               

               
               31-544, gnl|Mm7|chr8 (67279296-67279851)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               31-544, gnl|bosTau2|chr27 (24266444-24265938)
               

               
               31-544, gnl|Hg17|chr8 (19750370-19750994)
               

               
               31-544, gnl|Mm7|chr8 (67279296-67279851)

	31-544, gnl\|bosTau2\|chr27 (24266444-24265938)
	31-544, gnl\|Hg17\|chr8 (19750370-19750994)
	31-544, gnl\|Mm7\|chr8 (67279296-67279851)