Pig2-42J06
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTAACAGATGAAGCAACAGATGAGGAAAAAAGACAGGAATTGGTTAACTCTTTTAAAAG AATTTTGTGCGTTTTCCCAAACGCTACAACCTCAAAACAGAGATGCTTTTTTCAAGACTT TGTCAAACATGGGTATATTACCAGCTTTAGAAGTCATCCTTGGCATGGATGATACACAGG TGCGAAGTGCTGCTACTGATATATTCTCATACTTGGTTGAATATAATCCATCCATGGTAC GAGAGTTTGTCATGCAGGAGGCACAACAGAATGATGATGATATTTTGCTCATCAACCTCA TTATAGAACATATGATTTGTGATACAGACCCTGAACTTGGAGGAGCAGTCCAACTTATGG GCCTGCTTCGAACCTTGGTTGACCCAGAAAACATGCTAGCTACTGCCAATAAAACAGAAA AGACTGAATTTCTGGGTTTCTTCTACAAGCACTGTATGCATGTCCTTACTGCTCCATTAC TGGCAAATACAACAGAAGACAAACCTAGCAAAGATGACTTTCAGACTGCCCAGTTGTTGG CACTGGTATTGGAATTGTTAACAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTAACAGATGAAGCAACAGATGAGGAAAAAAGACAGGAATTGGTTAACTCTTTTAAAAG AATTTTGTGCGTTTTCCCAAACGCTACAACCTCAAAACAGAGATGCTTTTTTCAAGACTT TGTCAAACATGGGTATATTACCAGCTTTAGAAGTCATCCTTGGCATGGATGATACACAGG TGCGAAGTGCTGCTACTGATATATTCTCATACTTGGTTGAATATAATCCATCCATGGTAC GAGAGTTTGTCATGCAGGAGGCACAACAGAATGATGATGATATTTTGCTCATCAACCTCA TTATAGAACATATGATTTGTGATACAGACCCTGAACTTGGAGGAGCAGTCCAACTTATGG GCCTGCTTCGAACCTTGGTTGACCCAGAAAACATGCTAGCTACTGCCAATAAAACAGAAA AGACTGAATTTCTGGGTTTCTTCTACAAGCACTGTATGCATGTCCTTACTGCTCCATTAC TGGCAAATACAACAGAAGACAAACCTAGCAAAGATGACTTTCAGACTGCCCAGTTGTTGG CACTGGTATTGGAATTGTTAACAT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 162-279, + strand, RNAz p=0.792287 | |
| 411-513, - strand, RNAz p=0.848288 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 162-279, + strand, RNAz p=0.792287 | |
| 411-513, - strand, RNAz p=0.848288 |
| Aligned organism(s): 41 entry(ies) | More info |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
| 43-155, gnl|bosTau2|chr11 (20625614-20625503) | |
| 43-155, gnl|canFam2|chr10 (59590115-59590265) | |
| 43-155, gnl|danRer3|chr20 (42154173-42154322) | |
| 43-155, gnl|dasNov1|scaffold_11144 (6951-6802) | |
| 43-155, gnl|echTel1|scaffold_280310 (12707-12857) | |
| 43-155, gnl|fr1|chrUn (46924397-46924529) | |
| 43-155, gnl|galGal2|chr5 (41163643-41163795) | |
| 43-155, gnl|hg17|chr2 (55725386-55725536) | |
| 43-155, gnl|Hg17|chr2 (55725522-55725411) | |
| 43-155, gnl|loxAfr1|scaffold_21421 (41725-41837) | |
| 43-155, gnl|mm7|chr11 (29148314-29148170) | |
| 43-155, gnl|Mm7|chr11 (29148179-29148290) | |
| 43-155, gnl|monDom2|scaffold_1 (18527373-18527518) | |
| 43-155, gnl|oryCun1|scaffold_132615 (4675-4525) | |
| 43-155, gnl|panTro1|chr12 (57882994-57883144) | |
| 43-155, gnl|rheMac2|chr13 (55908900-55909050) | |
| 43-155, gnl|rn3|chr14 (110221158-110221014) | |
| 43-155, gnl|tetNig1|chr17 (10726334-10726202) | |
| 43-155, gnl|xenTro1|scaffold_392 (302543-302684) | |
| 162-279, gnl|bosTau2|chr21 (35425813-35425696) | |
| 162-279, gnl|Hg17|chr14 (91012063-91011946) | |
| 162-279, gnl|Mm7|chr12 (98548936-98548819) | |
| 411-513, gnl|bosTau2|chr21 (35423780-35423678) | |
| 411-513, gnl|canFam2|chr8 (65356283-65356394) | |
| 411-513, gnl|danRer3|chr20 (42151526-42151636) | |
| 411-513, gnl|dasNov1|scaffold_5748 (64059-63947) | |
| 411-513, gnl|echTel1|scaffold_281106 (20884-20996) | |
| 411-513, gnl|fr1|chrUn (131468932-131469042) | |
| 411-513, gnl|galGal2|chr5 (41161778-41161886) | |
| 411-513, gnl|hg17|chr14 (91009128-91009240) | |
| 411-513, gnl|Hg17|chr14 (91009232-91009130) | |
| 411-513, gnl|loxAfr1|scaffold_9610 (25987-25875) | |
| 411-513, gnl|mm7|chr12 (98546684-98546796) | |
| 411-513, gnl|Mm7|chr12 (98546788-98546686) | |
| 411-513, gnl|monDom2|scaffold_8 (33498176-33498064) | |
| 411-513, gnl|oryCun1|scaffold_132264 (8044-8156) | |
| 411-513, gnl|panTro1|chr15_random (20388934-20389046) | |
| 411-513, gnl|rheMac2|chr7 (154686948-154687060) | |
| 411-513, gnl|rn3|chr6 (125327765-125327877) | |
| 411-513, gnl|tetNig1|chr14 (3610060-3609950) | |
| 411-513, gnl|xenTro1|scaffold_22 (2636236-2636347) |
| Aligned organism(s): 41 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 43-155, gnl|bosTau2|chr11 (20625614-20625503) | |
| 43-155, gnl|canFam2|chr10 (59590115-59590265) | |
| 43-155, gnl|danRer3|chr20 (42154173-42154322) | |
| 43-155, gnl|dasNov1|scaffold_11144 (6951-6802) | |
| 43-155, gnl|echTel1|scaffold_280310 (12707-12857) | |
| 43-155, gnl|fr1|chrUn (46924397-46924529) | |
| 43-155, gnl|galGal2|chr5 (41163643-41163795) | |
| 43-155, gnl|hg17|chr2 (55725386-55725536) | |
| 43-155, gnl|Hg17|chr2 (55725522-55725411) | |
| 43-155, gnl|loxAfr1|scaffold_21421 (41725-41837) | |
| 43-155, gnl|mm7|chr11 (29148314-29148170) | |
| 43-155, gnl|Mm7|chr11 (29148179-29148290) | |
| 43-155, gnl|monDom2|scaffold_1 (18527373-18527518) | |
| 43-155, gnl|oryCun1|scaffold_132615 (4675-4525) | |
| 43-155, gnl|panTro1|chr12 (57882994-57883144) | |
| 43-155, gnl|rheMac2|chr13 (55908900-55909050) | |
| 43-155, gnl|rn3|chr14 (110221158-110221014) | |
| 43-155, gnl|tetNig1|chr17 (10726334-10726202) | |
| 43-155, gnl|xenTro1|scaffold_392 (302543-302684) | |
| 162-279, gnl|bosTau2|chr21 (35425813-35425696) | |
| 162-279, gnl|Hg17|chr14 (91012063-91011946) | |
| 162-279, gnl|Mm7|chr12 (98548936-98548819) | |
| 411-513, gnl|bosTau2|chr21 (35423780-35423678) | |
| 411-513, gnl|canFam2|chr8 (65356283-65356394) | |
| 411-513, gnl|danRer3|chr20 (42151526-42151636) | |
| 411-513, gnl|dasNov1|scaffold_5748 (64059-63947) | |
| 411-513, gnl|echTel1|scaffold_281106 (20884-20996) | |
| 411-513, gnl|fr1|chrUn (131468932-131469042) | |
| 411-513, gnl|galGal2|chr5 (41161778-41161886) | |
| 411-513, gnl|hg17|chr14 (91009128-91009240) | |
| 411-513, gnl|Hg17|chr14 (91009232-91009130) | |
| 411-513, gnl|loxAfr1|scaffold_9610 (25987-25875) | |
| 411-513, gnl|mm7|chr12 (98546684-98546796) | |
| 411-513, gnl|Mm7|chr12 (98546788-98546686) | |
| 411-513, gnl|monDom2|scaffold_8 (33498176-33498064) | |
| 411-513, gnl|oryCun1|scaffold_132264 (8044-8156) | |
| 411-513, gnl|panTro1|chr15_random (20388934-20389046) | |
| 411-513, gnl|rheMac2|chr7 (154686948-154687060) | |
| 411-513, gnl|rn3|chr6 (125327765-125327877) | |
| 411-513, gnl|tetNig1|chr14 (3610060-3609950) | |
| 411-513, gnl|xenTro1|scaffold_22 (2636236-2636347) |