Non-Coding RNA Search

Pig2-42L11

Sequence:


               
               AGGAAGCAGACAACTGCTTCTCAAGGTTTCTTTGAGTGCTACTAAGTTTTGACCTCTGAT
ACCAAAGATTAGGTTAAGCTATAACTTAATTCTCTTAAGGATTTAGTATTTTTTATATGT
ATATACAGGTTTCCAATGTGGCTTGGCCAGAGACGACACTATGAAAAAACGTAGCACCAA
ATCCTCGTTTTGATAAGACATCATCTCTGTTCTGAGTGAAGATATCCCTTCTAAGACTTG
AATACTGTTAGAAAAGAGGTCTTGACACGGGAAGTGTTATCTTGGCTTTGTATATAACCT
CAAAACCACCCCAGAGTCAGAAGGCCCTCTGTACTCCTCTTCCACCCAGACCTCAAGATC
CTTTGTCAGTCACCCTTACTAATGCCAAGGTTTCTTCCCTTAGAAATGAACTTTAGTATA
AATTTCCTTCCCTGCTTAAGCAAGCAGATATACGTGGCCACTTTGGCAGAACTTGCCGAT
GATACCAAGAAATATTTGATTCTACAAGCCAAGCCAAAAGGATGGCATCAAAAACTGTTT
TCACTAGTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGAAGCAGACAACTGCTTCTCAAGGTTTCTTTGAGTGCTACTAAGTTTTGACCTCTGAT
ACCAAAGATTAGGTTAAGCTATAACTTAATTCTCTTAAGGATTTAGTATTTTTTATATGT
ATATACAGGTTTCCAATGTGGCTTGGCCAGAGACGACACTATGAAAAAACGTAGCACCAA
ATCCTCGTTTTGATAAGACATCATCTCTGTTCTGAGTGAAGATATCCCTTCTAAGACTTG
AATACTGTTAGAAAAGAGGTCTTGACACGGGAAGTGTTATCTTGGCTTTGTATATAACCT
CAAAACCACCCCAGAGTCAGAAGGCCCTCTGTACTCCTCTTCCACCCAGACCTCAAGATC
CTTTGTCAGTCACCCTTACTAATGCCAAGGTTTCTTCCCTTAGAAATGAACTTTAGTATA
AATTTCCTTCCCTGCTTAAGCAAGCAGATATACGTGGCCACTTTGGCAGAACTTGCCGAT
GATACCAAGAAATATTTGATTCTACAAGCCAAGCCAAAAGGATGGCATCAAAAACTGTTT
TCACTAGTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               441-549, - strand, RNAz p=0.55708

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               441-549, - strand, RNAz p=0.55708

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-549, gnl|bosTau2|chr19 (14078734-14079289)
               

               
               1-549, gnl|Hg17|chr17 (24910144-24908794)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-549, gnl|bosTau2|chr19 (14078734-14079289)
               

               
               1-549, gnl|Hg17|chr17 (24910144-24908794)

	1-549, gnl\|bosTau2\|chr19 (14078734-14079289)
	1-549, gnl\|Hg17\|chr17 (24910144-24908794)