Non-Coding RNA Search

Pig2-43P17

Sequence:


               
               GCATCCGGAAGATCCAAAGTGGCAGTCGGAAGAGATCAACGAAATTTAAACATTGCGCGG
CACAAAGGGCATTTGGAGAGCTAAGGGCGGTGACCCCAATAGAATGGGGGCTATCTGGGT
CCAAAGAGGTGACAGATCAACTCACCTGCCTGGTGAAGAGGATGGCGGTGTCCCAGTACT
CAGGATGCTTGTCACTCACTTTGTTCAGCTTCTTCTGCCACGCGCAGAAGTTGCGCAGCG
TCAAGGCCGCGTTGCCCGTGACCTTGGGCCCTGTGTCGCGGTCTCCAAGAAGCAGCACCT
TGACCACGACGATGTTGATGGGGTTGAGGATGCTGGGATGGCGGTAGAGTCGCGCCGCCG
TGGCCAACAGCGTCAGCAGATAATGCTCCAAGTCCGCGCCGTGGAACTTGACCATGGACT
CGTCTGCCACCACCAGCGTCTCCACGTATCGCGGGATAGACACGAAGCGCTTGGCGCGCC
CGGACCTGCGCCGGCTGCGACCTTCCCCTAAGCCTATCCGCGGAGGCTTGTAAGCGTCCA
GGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCATCCGGAAGATCCAAAGTGGCAGTCGGAAGAGATCAACGAAATTTAAACATTGCGCGG
CACAAAGGGCATTTGGAGAGCTAAGGGCGGTGACCCCAATAGAATGGGGGCTATCTGGGT
CCAAAGAGGTGACAGATCAACTCACCTGCCTGGTGAAGAGGATGGCGGTGTCCCAGTACT
CAGGATGCTTGTCACTCACTTTGTTCAGCTTCTTCTGCCACGCGCAGAAGTTGCGCAGCG
TCAAGGCCGCGTTGCCCGTGACCTTGGGCCCTGTGTCGCGGTCTCCAAGAAGCAGCACCT
TGACCACGACGATGTTGATGGGGTTGAGGATGCTGGGATGGCGGTAGAGTCGCGCCGCCG
TGGCCAACAGCGTCAGCAGATAATGCTCCAAGTCCGCGCCGTGGAACTTGACCATGGACT
CGTCTGCCACCACCAGCGTCTCCACGTATCGCGGGATAGACACGAAGCGCTTGGCGCGCC
CGGACCTGCGCCGGCTGCGACCTTCCCCTAAGCCTATCCGCGGAGGCTTGTAAGCGTCCA
GGGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               318-437, + strand, RNAz p=0.997344

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               318-437, + strand, RNAz p=0.997344

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of AK123049, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of AK123049, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               54-544, gnl|bosTau2|chr29 (28873854-28874354)
               

               
               54-544, gnl|Hg17|chr11 (129825125-129824637)
               

               
               54-544, gnl|Mm7|chr9 (30821537-30822042)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               54-544, gnl|bosTau2|chr29 (28873854-28874354)
               

               
               54-544, gnl|Hg17|chr11 (129825125-129824637)
               

               
               54-544, gnl|Mm7|chr9 (30821537-30822042)

	54-544, gnl\|bosTau2\|chr29 (28873854-28874354)
	54-544, gnl\|Hg17\|chr11 (129825125-129824637)
	54-544, gnl\|Mm7\|chr9 (30821537-30822042)