Pig2-44K07
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TAAGACTAACTTTTGGAATAGTGGTGTAAGGCTGGAGAATGTACCAGCAGGACCTCAGCA
CCTGGAGTGGCCGGAGAGTGGAGCTTGTGGAGTCCCTGTAGCCGAACCTGCAGTTCTGGG
ATCAGCAGTCGAGAGCGCCAGTGTCCTGGGTTTGCCTGGATTCAGAGACTGGCAATGTCA
GGCCTATAGTGTTAGAACTTCGTACCCAAAGCATGTACTTCAGTGGCACGCTGTCATGGA
TGAAGAAAAACCATGTGCCCTGTTTTGCTCTCCTGTTGGAAAAGAACAGCCTATTCTTCT
CTCAGAAAAAGTGTTGGACGGGACTTCTTGTGGAAATCAGGGATCCGATATCTGTGCGAA
TGGCAGGTGTCAGAAAGTTGGCTGTGATGGTTTATTAGGGTCTCTTGCAAGGGAAGATCA
TTGTGGTGTCTGCAATGGCAATGGAAAATCATGCAAAATCATTAAAGGAGATTTTAACCA
CACCAGAGGAGCAGGTTATGTGGAAGTGCTGGTGATTCCTGCTGGAGCAAGAAGAATCAA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TAAGACTAACTTTTGGAATAGTGGTGTAAGGCTGGAGAATGTACCAGCAGGACCTCAGCA
CCTGGAGTGGCCGGAGAGTGGAGCTTGTGGAGTCCCTGTAGCCGAACCTGCAGTTCTGGG
ATCAGCAGTCGAGAGCGCCAGTGTCCTGGGTTTGCCTGGATTCAGAGACTGGCAATGTCA
GGCCTATAGTGTTAGAACTTCGTACCCAAAGCATGTACTTCAGTGGCACGCTGTCATGGA
TGAAGAAAAACCATGTGCCCTGTTTTGCTCTCCTGTTGGAAAAGAACAGCCTATTCTTCT
CTCAGAAAAAGTGTTGGACGGGACTTCTTGTGGAAATCAGGGATCCGATATCTGTGCGAA
TGGCAGGTGTCAGAAAGTTGGCTGTGATGGTTTATTAGGGTCTCTTGCAAGGGAAGATCA
TTGTGGTGTCTGCAATGGCAATGGAAAATCATGCAAAATCATTAAAGGAGATTTTAACCA
CACCAGAGGAGCAGGTTATGTGGAAGTGCTGGTGATTCCTGCTGGAGCAAGAAGAATCAA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
381-492, + strand, RNAmicro p=0.95683 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
381-492, + strand, RNAmicro p=0.95683 |
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1-151, gnl|bosTau2|chr7 (19243584-19243738) |
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1-151, gnl|Hg17|chr5 (129011335-129011489) |
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1-151, gnl|Mm7|chr18 (59358041-59358195) |
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371-499, gnl|bosTau2|chr7 (19254817-19254945) |
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371-499, gnl|canFam2|chr11 (21438597-21438780) |
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371-499, gnl|danRer3|chr5 (50927823-50927663) |
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371-499, gnl|dasNov1|scaffold_241987 (1609-1439) |
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371-499, gnl|echTel1|scaffold_322077 (55930-56092) |
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371-499, gnl|galGal2|chr10_random (1158890-1158715) |
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371-499, gnl|hg17|chr5 (129022159-129022336) |
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371-499, gnl|Hg17|chr5 (129022206-129022334) |
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371-499, gnl|loxAfr1|scaffold_25106 (4719-4550) |
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371-499, gnl|mm7|chr18 (59374541-59374709) |
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371-499, gnl|Mm7|chr18 (59374578-59374709) |
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371-499, gnl|oryCun1|scaffold_214884 (136311-136481) |
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371-499, gnl|panTro1|chr4 (135377185-135377362) |
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371-499, gnl|rheMac2|chr6 (126019574-126019750) |
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371-499, gnl|rn3|chr18 (54864244-54864410) |
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371-499, gnl|xenTro1|scaffold_2 (2494840-2494664) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-151, gnl|bosTau2|chr7 (19243584-19243738) |
|
1-151, gnl|Hg17|chr5 (129011335-129011489) |
|
1-151, gnl|Mm7|chr18 (59358041-59358195) |
| |
|
371-499, gnl|bosTau2|chr7 (19254817-19254945) |
|
371-499, gnl|canFam2|chr11 (21438597-21438780) |
|
371-499, gnl|danRer3|chr5 (50927823-50927663) |
|
371-499, gnl|dasNov1|scaffold_241987 (1609-1439) |
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371-499, gnl|echTel1|scaffold_322077 (55930-56092) |
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371-499, gnl|galGal2|chr10_random (1158890-1158715) |
|
371-499, gnl|hg17|chr5 (129022159-129022336) |
|
371-499, gnl|Hg17|chr5 (129022206-129022334) |
|
371-499, gnl|loxAfr1|scaffold_25106 (4719-4550) |
|
371-499, gnl|mm7|chr18 (59374541-59374709) |
|
371-499, gnl|Mm7|chr18 (59374578-59374709) |
|
371-499, gnl|oryCun1|scaffold_214884 (136311-136481) |
|
371-499, gnl|panTro1|chr4 (135377185-135377362) |
|
371-499, gnl|rheMac2|chr6 (126019574-126019750) |
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371-499, gnl|rn3|chr18 (54864244-54864410) |
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371-499, gnl|xenTro1|scaffold_2 (2494840-2494664) |
