Non-Coding RNA Search

Pig2-45J03

Sequence:


               
               GTGACAGGCTACCAGTTCATCCACACAGGAAAAGCACTACCTGTCCTTTGGGCTGTATGG
TGCCATCCTGGGCCTGCACCTGCTCATCCAGAGCCTGTTTGCCTTCCTGGAGCACCGGCG
CATGCGGCGGGCAGGCCGGCCACTGAAGCTGCCCTCCCCGCTGCAGCGCTCAGTGGCGCT
CTGCATCGCCGCGTACCAGGAGGACCCCGACTACTTGCGCAAGTGCCTGCGCTCGGCCCA
GCGCATCGCCTTCCCCGATCTCAAGGTGGTCATGGTGGTGGACGGCAATCGCCAGGAGGA
TGCCTACATGTTGGACATCTTCCACGAGGTGCTAGGTGGCAACGAGCAAGCCGGCTTCTT
TGTGTGGCGCAGCAACTTCCATGAGGCGGGTGAGGGCGAGACGGAGGCCAGCCTGCAGGA
GGGCATGGACCGTGTGCGGAATGTGGTGCGGGCCANCACCTTCTCCTGCATCATGCAGAA
GTGGGGAGGAAAGCGAGAGGTCATGTACACGGCCTTCAAGGCCCTTGGTGACTCCGTGGA
CTACATTCAGGTGTGTGACTCTGACACT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGACAGGCTACCAGTTCATCCACACAGGAAAAGCACTACCTGTCCTTTGGGCTGTATGG
TGCCATCCTGGGCCTGCACCTGCTCATCCAGAGCCTGTTTGCCTTCCTGGAGCACCGGCG
CATGCGGCGGGCAGGCCGGCCACTGAAGCTGCCCTCCCCGCTGCAGCGCTCAGTGGCGCT
CTGCATCGCCGCGTACCAGGAGGACCCCGACTACTTGCGCAAGTGCCTGCGCTCGGCCCA
GCGCATCGCCTTCCCCGATCTCAAGGTGGTCATGGTGGTGGACGGCAATCGCCAGGAGGA
TGCCTACATGTTGGACATCTTCCACGAGGTGCTAGGTGGCAACGAGCAAGCCGGCTTCTT
TGTGTGGCGCAGCAACTTCCATGAGGCGGGTGAGGGCGAGACGGAGGCCAGCCTGCAGGA
GGGCATGGACCGTGTGCGGAATGTGGTGCGGGCCANCACCTTCTCCTGCATCATGCAGAA
GTGGGGAGGAAAGCGAGAGGTCATGTACACGGCCTTCAAGGCCCTTGGTGACTCCGTGGA
CTACATTCAGGTGTGTGACTCTGACACT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|18256328|gb|AAH21853.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|18256328|gb|AAH21853.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               237-356, + strand, RNAz p=0.626697

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               237-356, + strand, RNAz p=0.626697

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-553, gnl|bosTau2|chr18 (14009181-14008630)
               

               
               1-553, gnl|Hg17|chr16 (67700887-67701438)
               

               
               1-553, gnl|Mm7|chr8 (105474132-105474686)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-553, gnl|bosTau2|chr18 (14009181-14008630)
               

               
               1-553, gnl|Hg17|chr16 (67700887-67701438)
               

               
               1-553, gnl|Mm7|chr8 (105474132-105474686)

	1-553, gnl\|bosTau2\|chr18 (14009181-14008630)
	1-553, gnl\|Hg17\|chr16 (67700887-67701438)
	1-553, gnl\|Mm7\|chr8 (105474132-105474686)