Non-Coding RNA Search

Pig2-45N12

Sequence:


               
               TCACATCTGAGGCCCATGGAGGCCCCGTGAGGTCACATACAGGTACTTGAGGGGCACCAG
AGGCCATCTGTAGTCACTGGAGCAAGGAGACAGCAGAAGTTGAGGTCGGGGTCTCAGGAA
GCCTGACATCCAGCAGTGCTAGTGTGTCTGACCCAGCATGATTGTCTATTTATTTTGATG
CCCTATTTATATTAACTTATTGGTGCTTTAAATAGCAAAGTTAATTCTCCTTTTCCTGCT
CCCTCTCCAACAAAAATAATATGATGGCTCCTTCTATGGGAGCTGGGGTCAGCCTTACCA
GGGCCTGGTCTGGAAGTCAAAGCAGGATGTTACCAGTGGGATAAGCCTTAGGGGTGAGGC
TCAGAAAAGGGTCAGGAGCTGAGAGAACTGGTCAGTCCAGGTGGGGGCTGGGGATCTGGC
TCCAACCCCTAACTCAACTGTGACTTGCTCTGGGGCTATCGGGATCCCGGCTGCAAGGCA
GGCAGGGCCGGTTTGTGGAGAGGCCAAGGGGCCTTTTCCTAGGCCACTGTGTTGCTTGGC
TCCAGGGGGCTCATTCCATCATGTTCTCTGGTGCCCCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCACATCTGAGGCCCATGGAGGCCCCGTGAGGTCACATACAGGTACTTGAGGGGCACCAG
AGGCCATCTGTAGTCACTGGAGCAAGGAGACAGCAGAAGTTGAGGTCGGGGTCTCAGGAA
GCCTGACATCCAGCAGTGCTAGTGTGTCTGACCCAGCATGATTGTCTATTTATTTTGATG
CCCTATTTATATTAACTTATTGGTGCTTTAAATAGCAAAGTTAATTCTCCTTTTCCTGCT
CCCTCTCCAACAAAAATAATATGATGGCTCCTTCTATGGGAGCTGGGGTCAGCCTTACCA
GGGCCTGGTCTGGAAGTCAAAGCAGGATGTTACCAGTGGGATAAGCCTTAGGGGTGAGGC
TCAGAAAAGGGTCAGGAGCTGAGAGAACTGGTCAGTCCAGGTGGGGGCTGGGGATCTGGC
TCCAACCCCTAACTCAACTGTGACTTGCTCTGGGGCTATCGGGATCCCGGCTGCAAGGCA
GGCAGGGCCGGTTTGTGGAGAGGCCAAGGGGCCTTTTCCTAGGCCACTGTGTTGCTTGGC
TCCAGGGGGCTCATTCCATCATGTTCTCTGGTGCCCCCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               1-155, + strand, RNAz p=0.853821

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-155, + strand, RNAz p=0.853821

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               5' of NM_002309, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               5' of NM_002309, +

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-478, gnl|bosTau2|chr17 (42460837-42460354)
               

               
               1-478, gnl|Hg17|chr22 (28963297-28962772)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-478, gnl|bosTau2|chr17 (42460837-42460354)
               

               
               1-478, gnl|Hg17|chr22 (28963297-28962772)

	1-478, gnl\|bosTau2\|chr17 (42460837-42460354)
	1-478, gnl\|Hg17\|chr22 (28963297-28962772)