Non-Coding RNA Search

Pig2-46E11

Sequence:


               
               AAGATGGCTACCTTTGGCCTTTTTAAGTTCTTTAGTGTATCTCCTTATTTTGTTTAGTTC
CATGCCCTTTAACCACATAGTGAATCACCATCTGTGTAGGCAATGGTTTACTTTCACCAT
CTATGTAGGCAGTGGTTTACTTTCTCTCTGCTTTTCCAAGCAAGGCTACTCTGTAATCAC
TATATTGCTGTGATTGAATGAGCACCAGAAGAATTAATCTTGTATTGTGGGGTTGAAGTT
AACAGCTTCACTACAGCCTTTCTGTCTTGAATCCTCTAATCCAGCTTCTGAATATTTCTA
GGCCACACTCAACTTGTGAAACCTAGAGCATTTTTAAGAATGAAACTCTTCATCCATTCC
CTTATTGTTAGCTAAAATATATGCATATCAGTAATTCAAAAATCCCTATAACTTTGTATG
TTTAGCCTGATTATTAAGACTTAGACTCCTACTTCTTAGTCAGTCTTAGACATATTCAGA
AGCTATTGGAGCCAAATAATTATGAAGGTGTTGAATGAGTCTACATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGATGGCTACCTTTGGCCTTTTTAAGTTCTTTAGTGTATCTCCTTATTTTGTTTAGTTC
CATGCCCTTTAACCACATAGTGAATCACCATCTGTGTAGGCAATGGTTTACTTTCACCAT
CTATGTAGGCAGTGGTTTACTTTCTCTCTGCTTTTCCAAGCAAGGCTACTCTGTAATCAC
TATATTGCTGTGATTGAATGAGCACCAGAAGAATTAATCTTGTATTGTGGGGTTGAAGTT
AACAGCTTCACTACAGCCTTTCTGTCTTGAATCCTCTAATCCAGCTTCTGAATATTTCTA
GGCCACACTCAACTTGTGAAACCTAGAGCATTTTTAAGAATGAAACTCTTCATCCATTCC
CTTATTGTTAGCTAAAATATATGCATATCAGTAATTCAAAAATCCCTATAACTTTGTATG
TTTAGCCTGATTATTAAGACTTAGACTCCTACTTCTTAGTCAGTCTTAGACATATTCAGA
AGCTATTGGAGCCAAATAATTATGAAGGTGTTGAATGAGTCTACATGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               235-354, - strand, RNAz p=0.99949

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               235-354, - strand, RNAz p=0.99949

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               120-528, gnl|bosTau2|chr4 (54112646-54113064)
               

               
               120-528, gnl|Hg17|chr6 (110657132-110657500)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               120-528, gnl|bosTau2|chr4 (54112646-54113064)
               

               
               120-528, gnl|Hg17|chr6 (110657132-110657500)

	120-528, gnl\|bosTau2\|chr4 (54112646-54113064)
	120-528, gnl\|Hg17\|chr6 (110657132-110657500)