Non-Coding RNA Search

Pig2-46E18

Sequence:


               
               GTACCTCCTATTATTAAGGTTCCAAATTGTATTTTCTTGTATTTGTCTGGAGACTGTTGA
TTCTTCTATAATCTAAATTGTATCTGAAATGTTGGTGTAATATTTGTTCTCACAGTAGCT
GGCATTTGTTCTGCAGTTAAATAGTGAGATAATAATCAGCAGTAGCAGCTTTACCGTGGG
AAAGGTAGACTCTCGTTCTGTGGAGCATAGTGTGGAATCAGTAACTTTCTCACGCTGCTT
TGGTATCATGTTCTTGCTGACCTTGTTTGAGTATTCACCATTGTTTGCTATCCCATGGTG
CCAGTATAACTAATGATTTTTTGCAAAAATAGAGAGCTCTTTTAGATGAGGAAATATACA
GGAAGGTATTTACATATTACAAGGAAGGCATTATTTTCTTCAAAACAATACCTTGGGCAC
TTTAGAGTTTTAGTATGCCTCAAGCGCTGGCATTTTCACAGTCTGCTAATGAATGGGGTT
GAAGCAAAACTGCTTCTACAGACAGGTAAAAATTGAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTACCTCCTATTATTAAGGTTCCAAATTGTATTTTCTTGTATTTGTCTGGAGACTGTTGA
TTCTTCTATAATCTAAATTGTATCTGAAATGTTGGTGTAATATTTGTTCTCACAGTAGCT
GGCATTTGTTCTGCAGTTAAATAGTGAGATAATAATCAGCAGTAGCAGCTTTACCGTGGG
AAAGGTAGACTCTCGTTCTGTGGAGCATAGTGTGGAATCAGTAACTTTCTCACGCTGCTT
TGGTATCATGTTCTTGCTGACCTTGTTTGAGTATTCACCATTGTTTGCTATCCCATGGTG
CCAGTATAACTAATGATTTTTTGCAAAAATAGAGAGCTCTTTTAGATGAGGAAATATACA
GGAAGGTATTTACATATTACAAGGAAGGCATTATTTTCTTCAAAACAATACCTTGGGCAC
TTTAGAGTTTTAGTATGCCTCAAGCGCTGGCATTTTCACAGTCTGCTAATGAATGGGGTT
GAAGCAAAACTGCTTCTACAGACAGGTAAAAATTGAAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               396-516, + strand, RNAz p=0.940561

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               396-516, + strand, RNAz p=0.940561

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-516, gnl|bosTau2|chr23 (26617797-26618302)
               

               
               5-516, gnl|Hg17|chr6 (24887637-24888152)
               

               
               5-516, gnl|Mm7|chr13 (24125618-24125182)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-516, gnl|bosTau2|chr23 (26617797-26618302)
               

               
               5-516, gnl|Hg17|chr6 (24887637-24888152)
               

               
               5-516, gnl|Mm7|chr13 (24125618-24125182)

	5-516, gnl\|bosTau2\|chr23 (26617797-26618302)
	5-516, gnl\|Hg17\|chr6 (24887637-24888152)
	5-516, gnl\|Mm7\|chr13 (24125618-24125182)