Non-Coding RNA Search

Pig2-47P18

Sequence:


               
               AGTGTTGTGAGGTCTCTAGTCAGGAATTCTATCCTCATCAAGGGTAAAGAGAGGAGGAGA
AAACTAAAGATCAGAGAGATGGGAACTTCCCCAAAAGAAAAAAGCACAGCAAAGTAATAT
ATGACAAAATAATATGTGGACATTTAAAATGAGACAAAACCAAGTCCTGGACCTCCTTAA
TGAATGGAGGAATAGCAATTCTTTTTGAGAGGATGGAGTCAAACTTGAGTGAGCATAAGA
GTAGACTCTTTGATGTAAGTGCTTTGCTGAATTTATATACAGAATTAACATGCCAGTCTA
CTTCCATCAAGGGCATCAAGTTGCAGCTATTATTTGCTTAGTTTGCAAAAATAGCCACCC
TGCATCCTTGAAGTTTAATTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTGTTGTGAGGTCTCTAGTCAGGAATTCTATCCTCATCAAGGGTAAAGAGAGGAGGAGA
AAACTAAAGATCAGAGAGATGGGAACTTCCCCAAAAGAAAAAAGCACAGCAAAGTAATAT
ATGACAAAATAATATGTGGACATTTAAAATGAGACAAAACCAAGTCCTGGACCTCCTTAA
TGAATGGAGGAATAGCAATTCTTTTTGAGAGGATGGAGTCAAACTTGAGTGAGCATAAGA
GTAGACTCTTTGATGTAAGTGCTTTGCTGAATTTATATACAGAATTAACATGCCAGTCTA
CTTCCATCAAGGGCATCAAGTTGCAGCTATTATTTGCTTAGTTTGCAAAAATAGCCACCC
TGCATCCTTGAAGTTTAATTC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               264-381, - strand, RNAz p=0.73084

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               264-381, - strand, RNAz p=0.73084

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-381, gnl|bosTau2|chr4 (27739377-27739026)
               

               
               1-381, gnl|Hg17|chr7 (111584462-111584838)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-381, gnl|bosTau2|chr4 (27739377-27739026)
               

               
               1-381, gnl|Hg17|chr7 (111584462-111584838)

	1-381, gnl\|bosTau2\|chr4 (27739377-27739026)
	1-381, gnl\|Hg17\|chr7 (111584462-111584838)