Non-Coding RNA Search

Pig2-48F14

Sequence:


               
               TAAAATATCTGAGCTTTTCAATACGTTCACATAGGAGCAAACAGTAGTTGAGAACAGAGC
TTTATTAAATCAGAAGTAAGATTTAAGTGGTACATAGTAGGTAAGAGCTGGTTTCTGGGG
AGTCTCTGTTACTGATTAATTTATACTTTTCAGTAGCTGAGATCCTGGCTTTTTCTGATC
AAGATCTGGGTTTTACTAAGAGTGTCTGTGAAGATACTGAACTAGGAATTGTTCACGGGA
TCTGACAGTTGAGAGGGCGTGGGGTACAGTGTTTCATGAGAACATGGCCTCTGCAAGGCC
CTCACACCAAGCAATGTTTAAATTTAGTTTCCGCATTCGTAACACAAATAGAGTGAAATT
CGCAGTTGACACAAAAATGAGTTGTCTTCATCCATCTTCCTTTCAAGTTGCTTACTTTGC
AAAGAATGCCAAATTTGGGACATTCCCATAATTGCCCTACACAGACAGACAACATACATC
CTTTATACATCAAAAGGAAAAAGCAGTGACTCAGGATGGAAGACCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAAATATCTGAGCTTTTCAATACGTTCACATAGGAGCAAACAGTAGTTGAGAACAGAGC
TTTATTAAATCAGAAGTAAGATTTAAGTGGTACATAGTAGGTAAGAGCTGGTTTCTGGGG
AGTCTCTGTTACTGATTAATTTATACTTTTCAGTAGCTGAGATCCTGGCTTTTTCTGATC
AAGATCTGGGTTTTACTAAGAGTGTCTGTGAAGATACTGAACTAGGAATTGTTCACGGGA
TCTGACAGTTGAGAGGGCGTGGGGTACAGTGTTTCATGAGAACATGGCCTCTGCAAGGCC
CTCACACCAAGCAATGTTTAAATTTAGTTTCCGCATTCGTAACACAAATAGAGTGAAATT
CGCAGTTGACACAAAAATGAGTTGTCTTCATCCATCTTCCTTTCAAGTTGCTTACTTTGC
AAAGAATGCCAAATTTGGGACATTCCCATAATTGCCCTACACAGACAGACAACATACATC
CTTTATACATCAAAAGGAAAAAGCAGTGACTCAGGATGGAAGACCCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               391-506, - strand, RNAz p=0.982868

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               391-506, - strand, RNAz p=0.982868

Aligned organism(s): 13 entry(ies)

More info

Aligned organism(s): 13 entry(ies)

Help | Less info


               
               1-527, gnl|bosTau2|chr29 (37612130-37612649)
               

               
               1-527, gnl|canFam2|chr12 (16160139-16160581)
               

               
               1-527, gnl|dasNov1|scaffold_4833 (52233-52676)
               

               
               1-527, gnl|echTel1|scaffold_310206 (54852-55263)
               

               
               1-527, gnl|hg17|chr6 (44907663-44908122)
               

               
               1-527, gnl|Hg17|chr6 (44908326-44907781)
               

               
               1-527, gnl|loxAfr1|scaffold_1512 (35736-35285)
               

               
               1-527, gnl|mm7|chr17 (43236144-43235743)
               

               
               1-527, gnl|Mm7|chr17 (43235560-43236041)
               

               
               1-527, gnl|oryCun1|scaffold_215233 (113526-113082)
               

               
               1-527, gnl|panTro1|chr5 (45518293-45518745)
               

               
               1-527, gnl|rheMac2|chr4 (44743426-44743870)
               

               
               1-527, gnl|rn3|chr9 (11496799-11497227)

Aligned organism(s): 13 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-527, gnl|bosTau2|chr29 (37612130-37612649)
               

               
               1-527, gnl|canFam2|chr12 (16160139-16160581)
               

               
               1-527, gnl|dasNov1|scaffold_4833 (52233-52676)
               

               
               1-527, gnl|echTel1|scaffold_310206 (54852-55263)
               

               
               1-527, gnl|hg17|chr6 (44907663-44908122)
               

               
               1-527, gnl|Hg17|chr6 (44908326-44907781)
               

               
               1-527, gnl|loxAfr1|scaffold_1512 (35736-35285)
               

               
               1-527, gnl|mm7|chr17 (43236144-43235743)
               

               
               1-527, gnl|Mm7|chr17 (43235560-43236041)
               

               
               1-527, gnl|oryCun1|scaffold_215233 (113526-113082)
               

               
               1-527, gnl|panTro1|chr5 (45518293-45518745)
               

               
               1-527, gnl|rheMac2|chr4 (44743426-44743870)
               

               
               1-527, gnl|rn3|chr9 (11496799-11497227)

	1-527, gnl\|bosTau2\|chr29 (37612130-37612649)
	1-527, gnl\|canFam2\|chr12 (16160139-16160581)
	1-527, gnl\|dasNov1\|scaffold_4833 (52233-52676)
	1-527, gnl\|echTel1\|scaffold_310206 (54852-55263)
	1-527, gnl\|hg17\|chr6 (44907663-44908122)
	1-527, gnl\|Hg17\|chr6 (44908326-44907781)
	1-527, gnl\|loxAfr1\|scaffold_1512 (35736-35285)
	1-527, gnl\|mm7\|chr17 (43236144-43235743)
	1-527, gnl\|Mm7\|chr17 (43235560-43236041)
	1-527, gnl\|oryCun1\|scaffold_215233 (113526-113082)
	1-527, gnl\|panTro1\|chr5 (45518293-45518745)
	1-527, gnl\|rheMac2\|chr4 (44743426-44743870)
	1-527, gnl\|rn3\|chr9 (11496799-11497227)