Non-Coding RNA Search

Pig2-48H11

Sequence:


               
               GTGCGCTCGACTGGATGTTCTTCACCACCTTCAAACAACCTTAAACGTGGGGCCACGTTA
AGGAGGAAAACCAGTAATATATTATATGAATCCATTAGCCTTTCACCAGGAACGCCCCCT
TCTACACTGAATAGTCCAAGGTACAGACGAGTGATGTGCAGCCCCTCATCAGAGAAGCTG
TCACCCAGTAGCCTTACGGCTGTGAAAAGAAATCATCGGGGAGAGACTTTGCTGCATATA
CCCTCAATTAAGGGCGACGTACCTTCTGGTGAATACCTCTTAGGGAATGGAAGCGACCCG
AATGTTAAAGACCACGCTGGATGGACGCCATTGCACGAAGCCTGCAATCATGGGCACCTG
AAGGTAGTGGAGTTGTTGCTCCAGCACAAGGCTGTGGTGAACACCACCGGGTATCAGAAC
GACTCGCCCCTTCATGATGCAGTGAAGAATGGGCACGTGGATATAGTCAAGCTGTTACTT
TCCTACGGAGCCTCCAAGAATGCTGTTAACATATTTGGTCTGCGGCCTGTGGATTATACA
GACAGTGAAAATATGAAATCACTATTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GTGCGCTCGACTGGATGTTCTTCACCACCTTCAAACAACCTTAAACGTGGGGCCACGTTA
AGGAGGAAAACCAGTAATATATTATATGAATCCATTAGCCTTTCACCAGGAACGCCCCCT
TCTACACTGAATAGTCCAAGGTACAGACGAGTGATGTGCAGCCCCTCATCAGAGAAGCTG
TCACCCAGTAGCCTTACGGCTGTGAAAAGAAATCATCGGGGAGAGACTTTGCTGCATATA
CCCTCAATTAAGGGCGACGTACCTTCTGGTGAATACCTCTTAGGGAATGGAAGCGACCCG
AATGTTAAAGACCACGCTGGATGGACGCCATTGCACGAAGCCTGCAATCATGGGCACCTG
AAGGTAGTGGAGTTGTTGCTCCAGCACAAGGCTGTGGTGAACACCACCGGGTATCAGAAC
GACTCGCCCCTTCATGATGCAGTGAAGAATGGGCACGTGGATATAGTCAAGCTGTTACTT
TCCTACGGAGCCTCCAAGAATGCTGTTAACATATTTGGTCTGCGGCCTGTGGATTATACA
GACAGTGAAAATATGAAATCACTATTGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               162-280, + strand, RNAz p=0.593042

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               162-280, + strand, RNAz p=0.593042

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               2-568, gnl|bosTau2|chr11 (25549630-25549071)
               

               
               2-568, gnl|Mm7|chr17 (13785684-13786780)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-568, gnl|bosTau2|chr11 (25549630-25549071)
               

               
               2-568, gnl|Mm7|chr17 (13785684-13786780)

	2-568, gnl\|bosTau2\|chr11 (25549630-25549071)
	2-568, gnl\|Mm7\|chr17 (13785684-13786780)