Pig2-48I02
|
GGAAGATCCATCATTTCATTACCATCAGGAAACGACACCATTACCAATACTGCCCAGACA
CCTAAGCAAAGGCTGGCATAGAGATTATGCTAATGAACTCCAGGTCCCAAGTCTTGTTGC
CTGGTGACAAAGTTTCACAGTTGAGGAGGAAGACCTGGGAGGAACGGGAAAGAGGGACTC
AACATAACACACCTGGGGACAGTAGTGGAAAAATAGAAACACTTCTTGTCTATACCTGCA
GTGAATCTATACTCTAAAAATCAGAATCTATCTTCTAGCAGTTTCATGTGACTTTTTCCT
CAAGCTGATCACCACTTGATCAGAACAGCATACTTAAAACACATTCCCCTACTAAAAGAA
CATGGCCAAGCGTGGGAAAGCCCCCAAGGGCAAAAAGATCACCCTCAGTGTGGCCAAGAA
TTGTATCAAGATCACATTCGATGGGAAAAAACGCCTCGACTTGAGCAAGATGGGAATTAC
CACTTTCCCCAAGTGTATTCTGCGACTCACTGATGTGGATGAGCTCGACCTTAGCCGGAA
TTTGATC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGAAGATCCATCATTTCATTACCATCAGGAAACGACACCATTACCAATACTGCCCAGACA
CCTAAGCAAAGGCTGGCATAGAGATTATGCTAATGAACTCCAGGTCCCAAGTCTTGTTGC
CTGGTGACAAAGTTTCACAGTTGAGGAGGAAGACCTGGGAGGAACGGGAAAGAGGGACTC
AACATAACACACCTGGGGACAGTAGTGGAAAAATAGAAACACTTCTTGTCTATACCTGCA
GTGAATCTATACTCTAAAAATCAGAATCTATCTTCTAGCAGTTTCATGTGACTTTTTCCT
CAAGCTGATCACCACTTGATCAGAACAGCATACTTAAAACACATTCCCCTACTAAAAGAA
CATGGCCAAGCGTGGGAAAGCCCCCAAGGGCAAAAAGATCACCCTCAGTGTGGCCAAGAA
TTGTATCAAGATCACATTCGATGGGAAAAAACGCCTCGACTTGAGCAAGATGGGAATTAC
CACTTTCCCCAAGTGTATTCTGCGACTCACTGATGTGGATGAGCTCGACCTTAGCCGGAA
TTTGATC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
262-547, gnl|bosTau2|chr28 (29211722-29212006) |
|
262-547, gnl|canFam2|chr28 (3832544-3832792) |
|
262-547, gnl|danRer3|chr13 (32233487-32233249) |
|
262-547, gnl|dasNov1|scaffold_50952 (3020-3267) |
|
262-547, gnl|echTel1|scaffold_324627 (40753-41000) |
|
262-547, gnl|fr1|chrUn (16406372-16406582) |
|
262-547, gnl|galGal2|chr6 (17684931-17685176) |
|
262-547, gnl|hg17|chr10 (49791976-49792224) |
|
262-547, gnl|Hg17|chr10 (49792296-49792021) |
|
262-547, gnl|mm7|chr14 (30440088-30439840) |
|
262-547, gnl|Mm7|chr14 (30439755-30440041) |
|
262-547, gnl|monDom2|scaffold_14 (20081364-20081609) |
|
262-547, gnl|oryCun1|scaffold_193316 (37978-38226) |
|
262-547, gnl|panTro1|chr8 (50122975-50123223) |
|
262-547, gnl|rheMac2|chr9 (47703369-47703121) |
|
262-547, gnl|rn3|chr16 (8548932-8548684) |
|
262-547, gnl|tetNig1|chrUn_random (120474041-120474251) |
|
262-547, gnl|xenTro1|scaffold_404 (127502-127751) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
262-547, gnl|bosTau2|chr28 (29211722-29212006) |
|
262-547, gnl|canFam2|chr28 (3832544-3832792) |
|
262-547, gnl|danRer3|chr13 (32233487-32233249) |
|
262-547, gnl|dasNov1|scaffold_50952 (3020-3267) |
|
262-547, gnl|echTel1|scaffold_324627 (40753-41000) |
|
262-547, gnl|fr1|chrUn (16406372-16406582) |
|
262-547, gnl|galGal2|chr6 (17684931-17685176) |
|
262-547, gnl|hg17|chr10 (49791976-49792224) |
|
262-547, gnl|Hg17|chr10 (49792296-49792021) |
|
262-547, gnl|mm7|chr14 (30440088-30439840) |
|
262-547, gnl|Mm7|chr14 (30439755-30440041) |
|
262-547, gnl|monDom2|scaffold_14 (20081364-20081609) |
|
262-547, gnl|oryCun1|scaffold_193316 (37978-38226) |
|
262-547, gnl|panTro1|chr8 (50122975-50123223) |
|
262-547, gnl|rheMac2|chr9 (47703369-47703121) |
|
262-547, gnl|rn3|chr16 (8548932-8548684) |
|
262-547, gnl|tetNig1|chrUn_random (120474041-120474251) |
|
262-547, gnl|xenTro1|scaffold_404 (127502-127751) |
