Non-Coding RNA Search

Pig2-48L18

Sequence:


               
               GATGGATTCTTCTTGCATGCTTCCATTTCTGATGACTACCAGCTTCATCAATGTAATTAT
AATTAGCTCTCTTCATCTTCCTTTTATGGCACCAGCTGGACAGACTGGTTCTCTTTACTG
CCCAGATTGGTGGCAGGGTTGCCTGTGTGGAGATAGGTGACAGGCACCATGGAATAACAG
ATGGTAAATTCAGGGCTTGTTGGCAATCAGCAGGTTTTTGCTAATGACTTAATTAGCTAT
GCAAATTGTCAAATCAGTGTGAACATTGGTTTTATCGAAAACTTTACCTAAATTAATTAC
CATAATTAAGTAGCAGAATGTCAAGGATATTGGCTGCATCAAAGGGCCTGGCTGAGTAGA
GGCAAGAGAGATCTGTCTTCAATTAAAATGTATACCGGCCTTGGGACAGAGAAAAACGCC
ATTTGGAAACGGGTTTTGCGAAAGCTGCAGAAAACTGCACTCTCCCCGTGTGGGCTGCTA
GTTTCCAAAGCCACCCCGAGGCCCTAAGTAAAAAGCGGTGGATCTTTGGAGGTCTTGCAA
AAGCGCCCAGCA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GATGGATTCTTCTTGCATGCTTCCATTTCTGATGACTACCAGCTTCATCAATGTAATTAT
AATTAGCTCTCTTCATCTTCCTTTTATGGCACCAGCTGGACAGACTGGTTCTCTTTACTG
CCCAGATTGGTGGCAGGGTTGCCTGTGTGGAGATAGGTGACAGGCACCATGGAATAACAG
ATGGTAAATTCAGGGCTTGTTGGCAATCAGCAGGTTTTTGCTAATGACTTAATTAGCTAT
GCAAATTGTCAAATCAGTGTGAACATTGGTTTTATCGAAAACTTTACCTAAATTAATTAC
CATAATTAAGTAGCAGAATGTCAAGGATATTGGCTGCATCAAAGGGCCTGGCTGAGTAGA
GGCAAGAGAGATCTGTCTTCAATTAAAATGTATACCGGCCTTGGGACAGAGAAAAACGCC
ATTTGGAAACGGGTTTTGCGAAAGCTGCAGAAAACTGCACTCTCCCCGTGTGGGCTGCTA
GTTTCCAAAGCCACCCCGAGGCCCTAAGTAAAAAGCGGTGGATCTTTGGAGGTCTTGCAA
AAGCGCCCAGCA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               118-277, + strand, RNAz p=0.902589

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               118-277, + strand, RNAz p=0.902589

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-549, gnl|bosTau2|chr6 (67602166-67602719)
               

               
               1-549, gnl|Hg17|chr4 (16181671-16181109)
               

               
               1-549, gnl|Mm7|chr5 (43794997-43794438)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-549, gnl|bosTau2|chr6 (67602166-67602719)
               

               
               1-549, gnl|Hg17|chr4 (16181671-16181109)
               

               
               1-549, gnl|Mm7|chr5 (43794997-43794438)

	1-549, gnl\|bosTau2\|chr6 (67602166-67602719)
	1-549, gnl\|Hg17\|chr4 (16181671-16181109)
	1-549, gnl\|Mm7\|chr5 (43794997-43794438)