Non-Coding RNA Search

Pig2-4O09

Sequence:


               
               CCCACACGCGGCCCCCGGTGCTCGGCCGCAGCCTCTCCGCCGCCGTCCGCCGCCGTCATG
AACATCCGCAGTGCCCGGCCGGACGACCTGATGAACATGCAGCACTGCAACCTCCTCTGC
CTTCCCGAGAACTACCAGATGAAGTACTATTTCTACCACGGCCTCTCCTGGCCGCAGCTC
TCGTACATCGCTGAGGACGAGGGCGGGAAGATTGTGGGCTACGTCCTGGCCAAGATGGAA
GAGGACCCCGACGACGTACCCCACGGACACATCACCTCCCTGGCCGTAAAGCGCTCGCAC
CGGCGCCTCGGCCTGGCGCAGAAGCTGATGGACCAGGCCTCCCGGGCCATGGTGGAGAAC
TTCGGCGCCGAGTACGTGTCTCTGCACGTGCGGAAGAGCAACCGGGCAGCCCTGCACCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCCACACGCGGCCCCCGGTGCTCGGCCGCAGCCTCTCCGCCGCCGTCCGCCGCCGTCATG
AACATCCGCAGTGCCCGGCCGGACGACCTGATGAACATGCAGCACTGCAACCTCCTCTGC
CTTCCCGAGAACTACCAGATGAAGTACTATTTCTACCACGGCCTCTCCTGGCCGCAGCTC
TCGTACATCGCTGAGGACGAGGGCGGGAAGATTGTGGGCTACGTCCTGGCCAAGATGGAA
GAGGACCCCGACGACGTACCCCACGGACACATCACCTCCCTGGCCGTAAAGCGCTCGCAC
CGGCGCCTCGGCCTGGCGCAGAAGCTGATGGACCAGGCCTCCCGGGCCATGGTGGAGAAC
TTCGGCGCCGAGTACGTGTCTCTGCACGTGCGGAAGAGCAACCGGGCAGCCCTGCACCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|39645147|gb|AAH63377.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|39645147|gb|AAH63377.1|

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               248-407, - strand, RNAz p=0.900798

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               248-407, - strand, RNAz p=0.900798

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               49-419, gnl|bosTau2|chr6 (51505477-51505847)
               

               
               49-419, gnl|Hg17|chr4 (80604219-80603849)
               

               
               49-419, gnl|Mm7|chr5 (96605656-96605286)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               49-419, gnl|bosTau2|chr6 (51505477-51505847)
               

               
               49-419, gnl|Hg17|chr4 (80604219-80603849)
               

               
               49-419, gnl|Mm7|chr5 (96605656-96605286)

	49-419, gnl\|bosTau2\|chr6 (51505477-51505847)
	49-419, gnl\|Hg17\|chr4 (80604219-80603849)
	49-419, gnl\|Mm7\|chr5 (96605656-96605286)