Pig2-54H05
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AGGTTCCCTTGCGGCTCCAGATTCTCCACCAGGGGAAGGTATTGAGAGAGCTCCAGGCCA
ACGCCTCGGCACAGGAGCTGGGCTTTGCTGAAGTGCTGCCCAACCTGACAGCCCAGGAGA
TGGACTGGCTGGTGCTGGGGGAGCTGCAGATGGCCCTGGAGAGGGCAAGTGGGCCAGGGC
TGCGCATCAGTGGACACATTGCTGCCAGGCAGAGCTGTGATGTCCTGCAAAGTGTCCTTT
GTGGGGCCGATGCCCTAATCCCAGTTCAGACGGGTGCAGCCGGCTCAGCCAGCCTTACAC
TGCTAGGAAACGGCTCCCTTATCTACCAAGTACAGGTAGTTGGCACGAGCAGTGAGGTGG
TGGCCGTGACGCTGGAGACCAAGCCTCAGCGGAGGAACCAGCACACTGTCCTGTGCCACA
TGGCTGGATTCCAGCCGGGAGGACACACAGCTGTNGGGTGTCTGCCCTGGGCTGGGTGCC
CGGNGGGCTCATATGCTGCTGCAGAATGAGCTGTTCCTAAACGT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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AGGTTCCCTTGCGGCTCCAGATTCTCCACCAGGGGAAGGTATTGAGAGAGCTCCAGGCCA
ACGCCTCGGCACAGGAGCTGGGCTTTGCTGAAGTGCTGCCCAACCTGACAGCCCAGGAGA
TGGACTGGCTGGTGCTGGGGGAGCTGCAGATGGCCCTGGAGAGGGCAAGTGGGCCAGGGC
TGCGCATCAGTGGACACATTGCTGCCAGGCAGAGCTGTGATGTCCTGCAAAGTGTCCTTT
GTGGGGCCGATGCCCTAATCCCAGTTCAGACGGGTGCAGCCGGCTCAGCCAGCCTTACAC
TGCTAGGAAACGGCTCCCTTATCTACCAAGTACAGGTAGTTGGCACGAGCAGTGAGGTGG
TGGCCGTGACGCTGGAGACCAAGCCTCAGCGGAGGAACCAGCACACTGTCCTGTGCCACA
TGGCTGGATTCCAGCCGGGAGGACACACAGCTGTNGGGTGTCTGCCCTGGGCTGGGTGCC
CGGNGGGCTCATATGCTGCTGCAGAATGAGCTGTTCCTAAACGT
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
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72-222, gnl|bosTau2|chr1 (52130217-52130067) |
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72-222, gnl|canFam2|chr34 (20265683-20265853) |
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72-222, gnl|danRer3|chrNA (28051467-28051637) |
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72-222, gnl|dasNov1|scaffold_94598 (4703-4873) |
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72-222, gnl|echTel1|scaffold_308267 (65289-65118) |
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72-222, gnl|fr1|chrUn (195835203-195835355) |
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72-222, gnl|hg17|chr3 (185583489-185583659) |
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72-222, gnl|Hg17|chr3 (185583503-185583653) |
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72-222, gnl|mm7|chr16 (20284716-20284886) |
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72-222, gnl|Mm7|chr16 (20284730-20284880) |
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72-222, gnl|panTro1|chr2 (189540157-189540327) |
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72-222, gnl|rheMac2|chr2 (102280609-102280439) |
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72-222, gnl|rn3|chr11 (82465374-82465204) |
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72-222, gnl|tetNig1|chr16 (7014145-7014299) |
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72-222, gnl|xenTro1|scaffold_244 (540329-540167) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
72-222, gnl|bosTau2|chr1 (52130217-52130067) |
|
72-222, gnl|canFam2|chr34 (20265683-20265853) |
|
72-222, gnl|danRer3|chrNA (28051467-28051637) |
|
72-222, gnl|dasNov1|scaffold_94598 (4703-4873) |
|
72-222, gnl|echTel1|scaffold_308267 (65289-65118) |
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72-222, gnl|fr1|chrUn (195835203-195835355) |
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72-222, gnl|hg17|chr3 (185583489-185583659) |
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72-222, gnl|Hg17|chr3 (185583503-185583653) |
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72-222, gnl|mm7|chr16 (20284716-20284886) |
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72-222, gnl|Mm7|chr16 (20284730-20284880) |
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72-222, gnl|panTro1|chr2 (189540157-189540327) |
|
72-222, gnl|rheMac2|chr2 (102280609-102280439) |
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72-222, gnl|rn3|chr11 (82465374-82465204) |
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72-222, gnl|tetNig1|chr16 (7014145-7014299) |
|
72-222, gnl|xenTro1|scaffold_244 (540329-540167) |
