Non-Coding RNA Search

Pig2-55E08

Sequence:


               
               TCATCTACCAGGTAGTGACAAGACTGATGAGTGTGGGAAGTGAGGACCGGCGGGAAGGCC
TTCCTGAAGGGGAGCCGGGAGTAGCCCGAGGCCGGGTTGTGGGGCCCTTAAGACCTCTCC
GCTGCTCACTGATCTTCCTCCTGGATCGCTCGAGGTGTCTTGGGAAGCCCATCTCTTGGT
CTACTGGGGCAGAAATTGGGCCTTAACTTGGAGTCCCTCATCCTGGCGGGTGGGGCCCTT
GGGCCCCTGGGCAAGCAGGGTGTGGGTTTCTGGGTGTGGAAGCAGCGTTTAACTCACTCT
CTTCTCCTTGCCTGGGCAGAAGTTTTGCTGCCAGCCCTGCCAAGTGGAAATACGTTATTT
ACAGTGTTTTGACAGGCGCATCGAAAGCCTGGCTGATAAAGGATGCCTTTGGGGCTGATC
TAATGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCATCTACCAGGTAGTGACAAGACTGATGAGTGTGGGAAGTGAGGACCGGCGGGAAGGCC
TTCCTGAAGGGGAGCCGGGAGTAGCCCGAGGCCGGGTTGTGGGGCCCTTAAGACCTCTCC
GCTGCTCACTGATCTTCCTCCTGGATCGCTCGAGGTGTCTTGGGAAGCCCATCTCTTGGT
CTACTGGGGCAGAAATTGGGCCTTAACTTGGAGTCCCTCATCCTGGCGGGTGGGGCCCTT
GGGCCCCTGGGCAAGCAGGGTGTGGGTTTCTGGGTGTGGAAGCAGCGTTTAACTCACTCT
CTTCTCCTTGCCTGGGCAGAAGTTTTGCTGCCAGCCCTGCCAAGTGGAAATACGTTATTT
ACAGTGTTTTGACAGGCGCATCGAAAGCCTGGCTGATAAAGGATGCCTTTGGGGCTGATC
TAATGGCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               214-328, - strand, RNAz p=0.955717

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               214-328, - strand, RNAz p=0.955717

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               18-428, gnl|bosTau2|chr21 (38539272-38539689)
               

               
               18-428, gnl|Hg17|chr14 (92599670-92599216)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               18-428, gnl|bosTau2|chr21 (38539272-38539689)
               

               
               18-428, gnl|Hg17|chr14 (92599670-92599216)

	18-428, gnl\|bosTau2\|chr21 (38539272-38539689)
	18-428, gnl\|Hg17\|chr14 (92599670-92599216)