Non-Coding RNA Search

Pig2-55P22

Sequence:


               
               GCCGAGGGTGAGACAGACACAGACACAGACCCTTTCACCCCCAGCGGCTCCATGCCTCTG
TCGTCCACGGGGGATGGCATTTCGGATTCAATCTGGACCCCTTCCAACAAGCCCACGTGA
GAGGGGTCATGGGCTGACTCCTCCTTGTCATGTAGACAGACTCTGTATAGCTCACTTTGC
TCTCACGCCCGCCTCGTACCCGTGAGATCGCCGGGGGCTGCGTCAAACGCCTGCATGTGC
GTGGCGGCCCCACCTGGGCAGGGGCTTGTCAAGGCTTTTTTCCTCCCCAGGTCACTACAG
TGAAGCCGCCTCCTTTCAAGCATGGTTTGCATGACTTTCCACTATATAAATGGTCCCGCT
AATCTCTTCTAGGATACACATTTATCTGCTGTTCTTACTTTGAATCATGGCTGGACCAGT
ACAGGGAGAAAGTACGGATGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCGAGGGTGAGACAGACACAGACACAGACCCTTTCACCCCCAGCGGCTCCATGCCTCTG
TCGTCCACGGGGGATGGCATTTCGGATTCAATCTGGACCCCTTCCAACAAGCCCACGTGA
GAGGGGTCATGGGCTGACTCCTCCTTGTCATGTAGACAGACTCTGTATAGCTCACTTTGC
TCTCACGCCCGCCTCGTACCCGTGAGATCGCCGGGGGCTGCGTCAAACGCCTGCATGTGC
GTGGCGGCCCCACCTGGGCAGGGGCTTGTCAAGGCTTTTTTCCTCCCCAGGTCACTACAG
TGAAGCCGCCTCCTTTCAAGCATGGTTTGCATGACTTTCCACTATATAAATGGTCCCGCT
AATCTCTTCTAGGATACACATTTATCTGCTGTTCTTACTTTGAATCATGGCTGGACCAGT
ACAGGGAGAAAGTACGGATGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               198-315, - strand, RNAz p=0.787337

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               198-315, - strand, RNAz p=0.787337

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-440, gnl|bosTau2|chr14 (4821068-4821508)
               

               
               1-440, gnl|Hg17|chr8 (133210810-133210374)
               

               
               1-440, gnl|Mm7|chr15 (66078660-66078227)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-440, gnl|bosTau2|chr14 (4821068-4821508)
               

               
               1-440, gnl|Hg17|chr8 (133210810-133210374)
               

               
               1-440, gnl|Mm7|chr15 (66078660-66078227)

	1-440, gnl\|bosTau2\|chr14 (4821068-4821508)
	1-440, gnl\|Hg17\|chr8 (133210810-133210374)
	1-440, gnl\|Mm7\|chr15 (66078660-66078227)