Non-Coding RNA Search

Pig2-56H13

Sequence:


               
               CCGCAGCATCAAGCTGGAGCTGCAGCGGCGCTCGCTCGAGGGGGAGCTGCAGCGCAGTCG
CCTGGGCCTGAGCGACCGGGAGGCCCAGGCCCAGGCCCTCCAGGAGCGGGTGGACTCCCT
GCAGAGGCAGGTGGCAGACAGCGAGGTGAAGGCGGGGACTCTGCAGCTGACGGTGGAGCG
GCTGAGTGGGGCCCTGGCCAGGGTGGAAGATAGCGAAGGGGCCCTGCGGGACAAGGTGCA
GAGCCTGACAGATGCTCTGACCCAGAGCAGCGCCAGCCTCACCAGCACCCAGGACAAGAA
CACACATCTACAGAAGGCCCTGACTGCCTGTGAACATGACCGCCAAGTGCTCCAAGAACG
GCTGGAGGCCGCACGGCAGGCCTCATCCGAGGCACGGAAGCAGAGCAGCTCCCTGGGTGA
GCAGGTGCATACTTTGCGAGGCGAGCTGGCGGACGTGGAGCTGCAGCGGGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGCAGCATCAAGCTGGAGCTGCAGCGGCGCTCGCTCGAGGGGGAGCTGCAGCGCAGTCG
CCTGGGCCTGAGCGACCGGGAGGCCCAGGCCCAGGCCCTCCAGGAGCGGGTGGACTCCCT
GCAGAGGCAGGTGGCAGACAGCGAGGTGAAGGCGGGGACTCTGCAGCTGACGGTGGAGCG
GCTGAGTGGGGCCCTGGCCAGGGTGGAAGATAGCGAAGGGGCCCTGCGGGACAAGGTGCA
GAGCCTGACAGATGCTCTGACCCAGAGCAGCGCCAGCCTCACCAGCACCCAGGACAAGAA
CACACATCTACAGAAGGCCCTGACTGCCTGTGAACATGACCGCCAAGTGCTCCAAGAACG
GCTGGAGGCCGCACGGCAGGCCTCATCCGAGGCACGGAAGCAGAGCAGCTCCCTGGGTGA
GCAGGTGCATACTTTGCGAGGCGAGCTGGCGGACGTGGAGCTGCAGCGGGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               146-265, + strand, RNAz p=0.610444

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               146-265, + strand, RNAz p=0.610444

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               78-361, gnl|bosTau2|chr2 (86091046-86090765)
               

               
               78-361, gnl|Hg17|chr1 (17040814-17041147)
               

               
               78-361, gnl|Mm7|chr4 (140398401-140398143)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               78-361, gnl|bosTau2|chr2 (86091046-86090765)
               

               
               78-361, gnl|Hg17|chr1 (17040814-17041147)
               

               
               78-361, gnl|Mm7|chr4 (140398401-140398143)

	78-361, gnl\|bosTau2\|chr2 (86091046-86090765)
	78-361, gnl\|Hg17\|chr1 (17040814-17041147)
	78-361, gnl\|Mm7\|chr4 (140398401-140398143)